Literature DB >> 12589463

Pre-mRNA splicing in Schizosaccharomyces pombe: regulatory role of a kinase conserved from fission yeast to mammals.

Andreas N Kuhn1, Norbert F Käufer.   

Abstract

Most primary messenger RNA transcripts (pre-mRNAs) in eukaryotes contain intervening sequences that must be precisely removed to generate a functional mRNA. The excision of the intervening sequences, the introns, from a pre-mRNA and the concomitant joining of the flanking sequences, the exons, is called pre-mRNA splicing. Pre-mRNA splicing takes place in large ribonucleoprotein machinery, the spliceosome. Although the function and components of this machinery appear to be highly conserved between organisms, many distinct differences between budding yeast, Saccharomyces cerevisiae, and fission yeast, Schizosaccharomyces pombe, have been found, emphasizing their evolutionary distance. Most interestingly, fission yeast appears to reflect the more conservative evolutionary development regarding pre-mRNA splicing. Many spliceosomal components, including the five small nuclear RNAs, which most likely form the catalytic core of the spliceosome, show a higher degree of similarity with the components of the splicing machinery found in mammals. In addition, several regulatory components of the spliceosome detected in mammals are absent in Sac. cerevisiae, but present in Sch. pombe. Here, we review recent progress made in our understanding of the control of pre-mRNA splicing in Sch. pombe. The focus is on Prp4p kinase, first discovered in fission yeast and also present in mammals, but absent in Sac. cerevisiae. Results from both mammals and Sch. pombe suggest that Prp4p plays a key role in regulating pre-mRNA splicing and in connecting this process with the cell cycle.

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Year:  2002        PMID: 12589463     DOI: 10.1007/s00294-002-0355-2

Source DB:  PubMed          Journal:  Curr Genet        ISSN: 0172-8083            Impact factor:   3.886


  88 in total

1.  Fission yeast Prp4p kinase regulates pre-mRNA splicing by phosphorylating a non-SR-splicing factor.

Authors:  W Schwelnus; K Richert; F Opitz; T Gross; Y Habara; T Tani; N F Käufer
Journal:  EMBO Rep       Date:  2001-01       Impact factor: 8.807

2.  Composition and functional characterization of the yeast spliceosomal penta-snRNP.

Authors:  Scott W Stevens; Daniel E Ryan; Helen Y Ge; Roger E Moore; Mary K Young; Terry D Lee; John Abelson
Journal:  Mol Cell       Date:  2002-01       Impact factor: 17.970

3.  A potential role for U2AF-SAP 155 interactions in recruiting U2 snRNP to the branch site.

Authors:  O Gozani; J Potashkin; R Reed
Journal:  Mol Cell Biol       Date:  1998-08       Impact factor: 4.272

4.  Identification, purification, and biochemical characterization of U2 small nuclear ribonucleoprotein auxiliary factor.

Authors:  P D Zamore; M R Green
Journal:  Proc Natl Acad Sci U S A       Date:  1989-12       Impact factor: 11.205

5.  Proteomics analysis reveals stable multiprotein complexes in both fission and budding yeasts containing Myb-related Cdc5p/Cef1p, novel pre-mRNA splicing factors, and snRNAs.

Authors:  Melanie D Ohi; Andrew J Link; Liping Ren; Jennifer L Jennings; W Hayes McDonald; Kathleen L Gould
Journal:  Mol Cell Biol       Date:  2002-04       Impact factor: 4.272

6.  Cef1p is a component of the Prp19p-associated complex and essential for pre-mRNA splicing.

Authors:  W Y Tsai; Y T Chow; H R Chen; K T Huang; R I Hong; S P Jan; N Y Kuo; T Y Tsao; C H Chen; S C Cheng
Journal:  J Biol Chem       Date:  1999-04-02       Impact factor: 5.157

7.  Characterization of U4 and U6 interactions with the 5' splice site using a S. cerevisiae in vitro trans-splicing system.

Authors:  T L Johnson; J Abelson
Journal:  Genes Dev       Date:  2001-08-01       Impact factor: 11.361

8.  Pre-spliceosome formation in S.pombe requires a stable complex of SF1-U2AF(59)-U2AF(23).

Authors:  Tao Huang; Josep Vilardell; Charles C Query
Journal:  EMBO J       Date:  2002-10-15       Impact factor: 11.598

9.  Myb-related fission yeast cdc5p is a component of a 40S snRNP-containing complex and is essential for pre-mRNA splicing.

Authors:  W H McDonald; R Ohi; N Smelkova; D Frendewey; K L Gould
Journal:  Mol Cell Biol       Date:  1999-08       Impact factor: 4.272

10.  Genome-wide bioinformatic and molecular analysis of introns in Saccharomyces cerevisiae.

Authors:  M Spingola; L Grate; D Haussler; M Ares
Journal:  RNA       Date:  1999-02       Impact factor: 4.942

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  29 in total

Review 1.  Endogenous mechanisms for the origins of spliceosomal introns.

Authors:  Francesco Catania; Xiang Gao; Douglas G Scofield
Journal:  J Hered       Date:  2009-07-27       Impact factor: 2.645

2.  Role of the ubiquitin-like protein Hub1 in splice-site usage and alternative splicing.

Authors:  Shravan Kumar Mishra; Tim Ammon; Grzegorz M Popowicz; Marcin Krajewski; Roland J Nagel; Manuel Ares; Tad A Holak; Stefan Jentsch
Journal:  Nature       Date:  2011-05-25       Impact factor: 49.962

3.  The Fission Yeast Pre-mRNA-processing Factor 18 (prp18+) Has Intron-specific Splicing Functions with Links to G1-S Cell Cycle Progression.

Authors:  Nagampalli Vijaykrishna; Geetha Melangath; Rakesh Kumar; Piyush Khandelia; Pushpinder Bawa; Raghavan Varadarajan; Usha Vijayraghavan
Journal:  J Biol Chem       Date:  2016-11-15       Impact factor: 5.157

4.  Sequential processing of a mitochondrial tandem protein: insights into protein import in Schizosaccharomyces pombe.

Authors:  Oleh Khalimonchuk; Martin Ott; Soledad Funes; Kai Ostermann; Gerhard Rödel; Johannes M Herrmann
Journal:  Eukaryot Cell       Date:  2006-07

5.  Phosphorylation by Prp4 kinase releases the self-inhibition of FgPrp31 in Fusarium graminearum.

Authors:  Xuli Gao; Ju Zhang; Chaoni Song; Kangyi Yuan; Jianhua Wang; Qiaojun Jin; Jin-Rong Xu
Journal:  Curr Genet       Date:  2018-04-18       Impact factor: 3.886

Review 6.  Multiple genetic and biochemical interactions of Brr2, Prp8, Prp31, Prp1 and Prp4 kinase suggest a function in the control of the activation of spliceosomes in Schizosaccharomyces pombe.

Authors:  Claudia A Bottner; Henning Schmidt; Sven Vogel; Melanie Michele; Norbert F Käufer
Journal:  Curr Genet       Date:  2005-10-12       Impact factor: 3.886

Review 7.  The power of fission: yeast as a tool for understanding complex splicing.

Authors:  Benjamin Jung Fair; Jeffrey A Pleiss
Journal:  Curr Genet       Date:  2016-09-14       Impact factor: 3.886

8.  Characterization and in vivo functional analysis of the Schizosaccharomyces pombe ICLN gene.

Authors:  Adrien Barbarossa; Etienne Antoine; Henry Neel; Thierry Gostan; Johann Soret; Rémy Bordonné
Journal:  Mol Cell Biol       Date:  2013-12-02       Impact factor: 4.272

9.  The splicing regulatory protein p18SRP is down-regulated in Alzheimer's disease brain.

Authors:  Klaus Heese; Masako Fujita; Hiroyasu Akatsu; Takayuki Yamamoto; Kenji Kosaka; Yasuo Nagai; Tohru Sawada
Journal:  J Mol Neurosci       Date:  2004       Impact factor: 3.444

10.  The N-terminus of Prp1 (Prp6/U5-102 K) is essential for spliceosome activation in vivo.

Authors:  Martin Lützelberger; Claudia A Bottner; Wiebke Schwelnus; Susanne Zock-Emmenthal; Aleh Razanau; Norbert F Käufer
Journal:  Nucleic Acids Res       Date:  2009-12-09       Impact factor: 16.971

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