Literature DB >> 12374752

Pre-spliceosome formation in S.pombe requires a stable complex of SF1-U2AF(59)-U2AF(23).

Tao Huang1, Josep Vilardell, Charles C Query.   

Abstract

We have initiated a biochemical analysis of splicing complexes in extracts from the fission yeast Schizosaccharomyces pombe. Extracts of S.pombe contain high levels of the spliceosome-like U2/5/6 tri-snRNP, which dissociates into mono-snRNPs in the presence of ATP, and supports binding of U2 snRNP to the 3' end of introns, yielding a weak ATP-independent E complex and the stable ATP-dependent complex A. The requirements for S.pombe complex A formation (pre-mRNA sequence elements, protein splicing factors, SF1/BBP and both subunits of U2AF) are analogous to those of mammalian complex A. The S.pombe SF1/BBP, U2AF(59) and U2AF(23) are tightly associated in a novel complex that is required for complex A formation. This pre-formed SF1- U2AF(59)-U2AF(23) complex may represent a streamlined mechanism for recognition of the branch site, pyrimidine tract and 3' splice site at the 3' end of introns.

Entities:  

Mesh:

Substances:

Year:  2002        PMID: 12374752      PMCID: PMC129087          DOI: 10.1093/emboj/cdf555

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  37 in total

1.  Functional association of U2 snRNP with the ATP-independent spliceosomal complex E.

Authors:  R Das; Z Zhou; R Reed
Journal:  Mol Cell       Date:  2000-05       Impact factor: 17.970

2.  Purification of splicing factor SF1, a heat-stable protein that functions in the assembly of a presplicing complex.

Authors:  A Krämer
Journal:  Mol Cell Biol       Date:  1992-10       Impact factor: 4.272

3.  Both subunits of U2AF recognize the 3' splice site in Caenorhabditis elegans.

Authors:  D A Zorio; T Blumenthal
Journal:  Nature       Date:  1999-12-16       Impact factor: 49.962

4.  Inhibition of msl-2 splicing by Sex-lethal reveals interaction between U2AF35 and the 3' splice site AG.

Authors:  L Merendino; S Guth; D Bilbao; C Martínez; J Valcárcel
Journal:  Nature       Date:  1999-12-16       Impact factor: 49.962

5.  Functional recognition of the 3' splice site AG by the splicing factor U2AF35.

Authors:  S Wu; C M Romfo; T W Nilsen; M R Green
Journal:  Nature       Date:  1999-12-16       Impact factor: 49.962

Review 6.  The second catalytic step of pre-mRNA splicing.

Authors:  J G Umen; C Guthrie
Journal:  RNA       Date:  1995-11       Impact factor: 4.942

7.  Phosphorylation of splicing factor SF1 on Ser20 by cGMP-dependent protein kinase regulates spliceosome assembly.

Authors:  X Wang; S Bruderer; Z Rafi; J Xue; P J Milburn; A Krämer; P J Robinson
Journal:  EMBO J       Date:  1999-08-16       Impact factor: 11.598

8.  Splicing factor SF1 from Drosophila and Caenorhabditis: presence of an N-terminal RS domain and requirement for viability.

Authors:  R Mazroui; A Puoti; A Krämer
Journal:  RNA       Date:  1999-12       Impact factor: 4.942

9.  mRNAs encoding zinc finger protein isoforms are expressed by alternative splicing of an in-frame intron in fission yeast.

Authors:  K Okazaki; O Niwa
Journal:  DNA Res       Date:  2000-02-28       Impact factor: 4.458

10.  SLU7 and a novel activity, SSF1, act during the PRP16-dependent step of yeast pre-mRNA splicing.

Authors:  A Ansari; B Schwer
Journal:  EMBO J       Date:  1995-08-15       Impact factor: 11.598

View more
  34 in total

1.  The WW domain-containing proteins interact with the early spliceosome and participate in pre-mRNA splicing in vivo.

Authors:  Kai-Ti Lin; Ruei-Min Lu; Woan-Yuh Tarn
Journal:  Mol Cell Biol       Date:  2004-10       Impact factor: 4.272

2.  Genomic mRNA profiling reveals compensatory mechanisms for the requirement of the essential splicing factor U2AF.

Authors:  Vinod Sridharan; Joseph Heimiller; Ravinder Singh
Journal:  Mol Cell Biol       Date:  2010-12-13       Impact factor: 4.272

Review 3.  Diverse regulation of 3' splice site usage.

Authors:  Muhammad Sohail; Jiuyong Xie
Journal:  Cell Mol Life Sci       Date:  2015-09-14       Impact factor: 9.261

4.  The EF-G-like GTPase Snu114p regulates spliceosome dynamics mediated by Brr2p, a DExD/H box ATPase.

Authors:  Eliza C Small; Stephanie R Leggett; Adrienne A Winans; Jonathan P Staley
Journal:  Mol Cell       Date:  2006-08-04       Impact factor: 17.970

5.  Structural and functional characterization of the N terminus of Schizosaccharomyces pombe Cwf10.

Authors:  S Brent Livesay; Scott E Collier; Danny A Bitton; Jürg Bähler; Melanie D Ohi
Journal:  Eukaryot Cell       Date:  2013-09-06

6.  The Fission Yeast Pre-mRNA-processing Factor 18 (prp18+) Has Intron-specific Splicing Functions with Links to G1-S Cell Cycle Progression.

Authors:  Nagampalli Vijaykrishna; Geetha Melangath; Rakesh Kumar; Piyush Khandelia; Pushpinder Bawa; Raghavan Varadarajan; Usha Vijayraghavan
Journal:  J Biol Chem       Date:  2016-11-15       Impact factor: 5.157

7.  Splicing factors SF1 and U2AF associate in extraspliceosomal complexes.

Authors:  José Rino; Joana M P Desterro; Teresa R Pacheco; Theodorus W J Gadella; Maria Carmo-Fonseca
Journal:  Mol Cell Biol       Date:  2008-02-19       Impact factor: 4.272

8.  Characterization and in vivo functional analysis of the Schizosaccharomyces pombe ICLN gene.

Authors:  Adrien Barbarossa; Etienne Antoine; Henry Neel; Thierry Gostan; Johann Soret; Rémy Bordonné
Journal:  Mol Cell Biol       Date:  2013-12-02       Impact factor: 4.272

9.  DExD/H-box Prp5 protein is in the spliceosome during most of the splicing cycle.

Authors:  Tomasz R Kosowski; Heather R Keys; Tiffani K Quan; Stephanie W Ruby
Journal:  RNA       Date:  2009-05-18       Impact factor: 4.942

10.  The N-terminus of Prp1 (Prp6/U5-102 K) is essential for spliceosome activation in vivo.

Authors:  Martin Lützelberger; Claudia A Bottner; Wiebke Schwelnus; Susanne Zock-Emmenthal; Aleh Razanau; Norbert F Käufer
Journal:  Nucleic Acids Res       Date:  2009-12-09       Impact factor: 16.971

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.