Literature DB >> 12582710

A genetic linkage map for Eucalyptus globulus with candidate loci for wood, fibre, and floral traits.

K. A. Thamarus1, K. Groom, J. Murrell, M. Byrne, G. F. Moran.   

Abstract

A genetic linkage map containing potential candidate loci for wood, fibre and floral traits has been constructed for Eucalyptus globulus (Labill.) based on the segregation of 249 codominant loci in an outbred F(1) population of 148 individuals. The map contains 204 RFLP loci, including 31 cambium-specific expressed sequence tags (ESTs) and 14 known function genes, and 40 microsatellite and five isozyme loci. Independent male and female maps were constructed, and the 98 loci (39%) that segregated in both parents were used to combine the parental maps into an integrated map. The 249 loci mapped to 11 major linkage groups ( n=11 in eucalypts) and a 12th small linkage group containing three loci that segregated in the male parent only. Total map distance is 1375 cM with an average interval of 6 cM. Forty one of the mapped loci identify known proteins (five isozymes) or sequences with known function (14 genes and 22 ESTs). The mapped genes include enzymes involved in lignin and cell-wall polysaccharide biosynthesis, and floral-development genes. This map will be used to locate quantitative trait loci for wood, fibre, and other traits in Eucalyptus.

Entities:  

Year:  2002        PMID: 12582710     DOI: 10.1007/s001220100717

Source DB:  PubMed          Journal:  Theor Appl Genet        ISSN: 0040-5752            Impact factor:   5.699


  18 in total

Review 1.  Molecular markers from the transcribed/expressed region of the genome in higher plants.

Authors:  P K Gupta; S Rustgi
Journal:  Funct Integr Genomics       Date:  2004-04-17       Impact factor: 3.410

2.  The first genetic linkage map of Eucommia ulmoides.

Authors:  Dawei Wang; Yu Li; Long Li; Yongcheng Wei; Zhouqi Li
Journal:  J Genet       Date:  2014-04       Impact factor: 1.166

3.  Marker-based quantitative genetics in the wild?: the heritability and genetic correlation of chemical defenses in eucalyptus.

Authors:  R L Andrew; R Peakall; I R Wallis; J T Wood; E J Knight; W J Foley
Journal:  Genetics       Date:  2005-09-02       Impact factor: 4.562

4.  Comparative genetic linkage maps of Eucalyptus grandis, Eucalyptus globulus and their F1 hybrid based on a double pseudo-backcross mapping approach.

Authors:  A A Myburg; A R Griffin; R R Sederoff; R W Whetten
Journal:  Theor Appl Genet       Date:  2003-07-01       Impact factor: 5.699

5.  A high-density Diversity Arrays Technology (DArT) microarray for genome-wide genotyping in Eucalyptus.

Authors:  Carolina P Sansaloni; César D Petroli; Jason Carling; Corey J Hudson; Dorothy A Steane; Alexander A Myburg; Dario Grattapaglia; René E Vaillancourt; Andrzej Kilian
Journal:  Plant Methods       Date:  2010-06-30       Impact factor: 4.993

6.  Identification of quantitative trait loci for wood and fibre properties in two full-sib properties of Eucalyptus globulus.

Authors:  K Thamarus; K Groom; A Bradley; C A Raymond; L R Schimleck; E R Williams; G F Moran
Journal:  Theor Appl Genet       Date:  2004-08       Impact factor: 5.699

7.  Effects of native forest regeneration practices on genetic diversity in Eucalyptus consideniana.

Authors:  Jeffrey C Glaubitz; Jan C Murrell; Gavin F Moran
Journal:  Theor Appl Genet       Date:  2003-05-14       Impact factor: 5.699

8.  First RFLP linkage map of red clover ( Trifolium pratense L.) based on cDNA probes and its transferability to other red clover germplasm.

Authors:  S Isobe; I Klimenko; S Ivashuta; M Gau; N N Kozlov
Journal:  Theor Appl Genet       Date:  2003-09-16       Impact factor: 5.699

9.  High-throughput SNP genotyping in the highly heterozygous genome of Eucalyptus: assay success, polymorphism and transferability across species.

Authors:  Dario Grattapaglia; Orzenil B Silva-Junior; Matias Kirst; Bruno Marco de Lima; Danielle A Faria; Georgios J Pappas
Journal:  BMC Plant Biol       Date:  2011-04-14       Impact factor: 4.215

10.  Genomic characterization of DArT markers based on high-density linkage analysis and physical mapping to the Eucalyptus genome.

Authors:  César D Petroli; Carolina P Sansaloni; Jason Carling; Dorothy A Steane; René E Vaillancourt; Alexander A Myburg; Orzenil Bonfim da Silva; Georgios Joannis Pappas; Andrzej Kilian; Dario Grattapaglia
Journal:  PLoS One       Date:  2012-09-11       Impact factor: 3.240

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