Literature DB >> 12558503

U2 small nuclear ribonucleoprotein particle (snRNP) auxiliary factor of 65 kDa, U2AF65, can promote U1 snRNP recruitment to 5' splice sites.

Patrik Förch1, Livia Merendino, Concepción Martínez, Juan Valcárcel.   

Abstract

The splicing factor U2AF(65), U2 small nuclear ribonucleoprotein particle (snRNP) auxillary factor of 65 kDa, binds to pyrimidine-rich sequences at 3' splice sites to recruit U2 snRNP to pre-mRNAs. We report that U2AF(65) can also promote the recruitment of U1 snRNP to weak 5' splice sites that are followed by uridine-rich sequences. The arginine- and serine-rich domain of U2AF(65) is critical for U1 recruitment, and we discuss the role of its RNA-RNA annealing activity in this novel function of U2AF(65).

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Year:  2003        PMID: 12558503      PMCID: PMC1223361          DOI: 10.1042/BJ20021202

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  55 in total

1.  A biochemical function for the Sm complex.

Authors:  D Zhang; N Abovich; M Rosbash
Journal:  Mol Cell       Date:  2001-02       Impact factor: 17.970

2.  Yeast U1 snRNP-pre-mRNA complex formation without U1snRNA-pre-mRNA base pairing.

Authors:  H Du; M Rosbash
Journal:  RNA       Date:  2001-01       Impact factor: 4.942

3.  Interaction of the U1 snRNP with nonconserved intronic sequences affects 5' splice site selection.

Authors:  O Puig; A Gottschalk; P Fabrizio; B Séraphin
Journal:  Genes Dev       Date:  1999-03-01       Impact factor: 11.361

4.  The RNA-binding protein TIA-1 is a novel mammalian splicing regulator acting through intron sequences adjacent to a 5' splice site.

Authors:  F Del Gatto-Konczak; C F Bourgeois; C Le Guiner; L Kister; M C Gesnel; J Stévenin; R Breathnach
Journal:  Mol Cell Biol       Date:  2000-09       Impact factor: 4.272

5.  Deletion of MUD2, the yeast homolog of U2AF65, can bypass the requirement for sub2, an essential spliceosomal ATPase.

Authors:  A L Kistler; C Guthrie
Journal:  Genes Dev       Date:  2001-01-01       Impact factor: 11.361

6.  Identification and characterization of yUAP/Sub2p, a yeast homolog of the essential human pre-mRNA splicing factor hUAP56.

Authors:  M Zhang; M R Green
Journal:  Genes Dev       Date:  2001-01-01       Impact factor: 11.361

7.  Multiple roles for the yeast SUB2/yUAP56 gene in splicing.

Authors:  D Libri; N Graziani; C Saguez; J Boulay
Journal:  Genes Dev       Date:  2001-01-01       Impact factor: 11.361

8.  Inhibition of msl-2 splicing by Sex-lethal reveals interaction between U2AF35 and the 3' splice site AG.

Authors:  L Merendino; S Guth; D Bilbao; C Martínez; J Valcárcel
Journal:  Nature       Date:  1999-12-16       Impact factor: 49.962

9.  Functional recognition of the 3' splice site AG by the splicing factor U2AF35.

Authors:  S Wu; C M Romfo; T W Nilsen; M R Green
Journal:  Nature       Date:  1999-12-16       Impact factor: 49.962

10.  Kinetic role for mammalian SF1/BBP in spliceosome assembly and function after polypyrimidine tract recognition by U2AF.

Authors:  S Guth; J Valcárcel
Journal:  J Biol Chem       Date:  2000-12-01       Impact factor: 5.157

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  12 in total

1.  Genomic mRNA profiling reveals compensatory mechanisms for the requirement of the essential splicing factor U2AF.

Authors:  Vinod Sridharan; Joseph Heimiller; Ravinder Singh
Journal:  Mol Cell Biol       Date:  2010-12-13       Impact factor: 4.272

2.  RS domains contact splicing signals and promote splicing by a common mechanism in yeast through humans.

Authors:  Haihong Shen; Michael R Green
Journal:  Genes Dev       Date:  2006-06-09       Impact factor: 11.361

3.  An Unusual U2AF2 Inhibits Splicing and Attenuates the Virulence of the Human Protozoan Parasite Entamoeba histolytica.

Authors:  Gretter González-Blanco; Guillermina García-Rivera; Patricia Talmás-Rohana; Ester Orozco; José Manuel Galindo-Rosales; Cristina Vélez; Odila Salucedo-Cárdenas; Elisa Azuara-Liceaga; Mario Alberto Rodríguez-Rodríguez; Tomoyoshi Nozaki; Jesús Valdés
Journal:  Front Cell Infect Microbiol       Date:  2022-06-17       Impact factor: 6.073

4.  Introns and splicing elements of five diverse fungi.

Authors:  Doris M Kupfer; Scott D Drabenstot; Kent L Buchanan; Hongshing Lai; Hua Zhu; David W Dyer; Bruce A Roe; Juneann W Murphy
Journal:  Eukaryot Cell       Date:  2004-10

5.  A conditional role of U2AF in splicing of introns with unconventional polypyrimidine tracts.

Authors:  Vinod Sridharan; Ravinder Singh
Journal:  Mol Cell Biol       Date:  2007-08-20       Impact factor: 4.272

6.  The pivotal roles of TIA proteins in 5' splice-site selection of alu exons and across evolution.

Authors:  Nurit Gal-Mark; Schraga Schwartz; Oren Ram; Eduardo Eyras; Gil Ast
Journal:  PLoS Genet       Date:  2009-11-13       Impact factor: 5.917

7.  Efficient transcription through an intron requires the binding of an Sm-type U1 snRNP with intact stem loop II to the splice donor.

Authors:  Marina R Alexander; Adam K Wheatley; Rob J Center; Damian F J Purcell
Journal:  Nucleic Acids Res       Date:  2010-01-13       Impact factor: 16.971

8.  hnRNP H binding at the 5' splice site correlates with the pathological effect of two intronic mutations in the NF-1 and TSHbeta genes.

Authors:  Emanuele Buratti; Marco Baralle; Laura De Conti; Diana Baralle; Maurizio Romano; Youhna M Ayala; Francisco E Baralle
Journal:  Nucleic Acids Res       Date:  2004-08-06       Impact factor: 16.971

9.  Binding of hnRNP H and U2AF65 to respective G-codes and a poly-uridine tract collaborate in the N50-5'ss selection of the REST N exon in H69 cells.

Authors:  Carlos Ortuño-Pineda; José Manuel Galindo-Rosales; José Victor Calderón-Salinas; Nicolás Villegas-Sepúlveda; Odila Saucedo-Cárdenas; Mónica De Nova-Ocampo; Jesús Valdés
Journal:  PLoS One       Date:  2012-07-05       Impact factor: 3.240

10.  Alternative splicing of Alu exons--two arms are better than one.

Authors:  Nurit Gal-Mark; Schraga Schwartz; Gil Ast
Journal:  Nucleic Acids Res       Date:  2008-02-14       Impact factor: 16.971

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