Literature DB >> 11156603

Multiple roles for the yeast SUB2/yUAP56 gene in splicing.

D Libri1, N Graziani, C Saguez, J Boulay.   

Abstract

The UAP56 gene has been shown to be required for prespliceosome assembly in mammals. We report here the isolation of the Schizosaccharomyces pombe ortholog of this gene by heterologous complementation of a combined PRP40HA(3)/nam8Delta defect in budding yeast. The Saccharomyces cerevisiae ortholog, YDL084w/SUB2, is also able to suppress this defect. We show that SUB2 is involved in splicing in vivo as well as in vitro. Sub2 defective extracts form a stalled intermediate that contains U2snRNP and can be chased into functional spliceosomes. Our experiments also suggest a role for this protein in events that precede prespliceosome formation. Data reported here as well as in the accompanying papers strongly implicate Sub2p in multiple steps of the spliceosome assembly process.

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Year:  2001        PMID: 11156603      PMCID: PMC312604          DOI: 10.1101/gad.852101

Source DB:  PubMed          Journal:  Genes Dev        ISSN: 0890-9369            Impact factor:   11.361


  24 in total

1.  Identification of functional U1 snRNA-pre-mRNA complexes committed to spliceosome assembly and splicing.

Authors:  B Seraphin; M Rosbash
Journal:  Cell       Date:  1989-10-20       Impact factor: 41.582

2.  The Saccharomyces cerevisiae Prp5 protein has RNA-dependent ATPase activity with specificity for U2 small nuclear RNA.

Authors:  C L O'Day; G Dalbadie-McFarland; J Abelson
Journal:  J Biol Chem       Date:  1996-12-27       Impact factor: 5.157

3.  Identification of novel genes required for yeast pre-mRNA splicing by means of cold-sensitive mutations.

Authors:  S M Noble; C Guthrie
Journal:  Genetics       Date:  1996-05       Impact factor: 4.562

4.  A dual role for BBP/ScSF1 in nuclear pre-mRNA retention and splicing.

Authors:  B Rutz; B Séraphin
Journal:  EMBO J       Date:  2000-04-17       Impact factor: 11.598

5.  Four yeast spliceosomal proteins (PRP5, PRP9, PRP11, and PRP21) interact to promote U2 snRNP binding to pre-mRNA.

Authors:  S W Ruby; T H Chang; J Abelson
Journal:  Genes Dev       Date:  1993-10       Impact factor: 11.361

6.  Transcriptional pulse-chase analysis reveals a role for a novel snRNP-associated protein in the manufacture of spliceosomal snRNPs.

Authors:  S M Noble; C Guthrie
Journal:  EMBO J       Date:  1996-08-15       Impact factor: 11.598

7.  Identification of Prp40, a novel essential yeast splicing factor associated with the U1 small nuclear ribonucleoprotein particle.

Authors:  H Y Kao; P G Siliciano
Journal:  Mol Cell Biol       Date:  1996-03       Impact factor: 4.272

8.  A novel role for a U5 snRNP protein in 3' splice site selection.

Authors:  J G Umen; C Guthrie
Journal:  Genes Dev       Date:  1995-04-01       Impact factor: 11.361

9.  New heterologous modules for classical or PCR-based gene disruptions in Saccharomyces cerevisiae.

Authors:  A Wach; A Brachat; R Pöhlmann; P Philippsen
Journal:  Yeast       Date:  1994-12       Impact factor: 3.239

10.  The yeast branchpoint sequence is not required for the formation of a stable U1 snRNA-pre-mRNA complex and is recognized in the absence of U2 snRNA.

Authors:  B Séraphin; M Rosbash
Journal:  EMBO J       Date:  1991-05       Impact factor: 11.598

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  64 in total

1.  The ATP requirement for U2 snRNP addition is linked to the pre-mRNA region 5' to the branch site.

Authors:  C M Newnham; C C Query
Journal:  RNA       Date:  2001-09       Impact factor: 4.942

2.  Intron status and 3'-end formation control cotranscriptional export of mRNA.

Authors:  Elissa P Lei; Pamela A Silver
Journal:  Genes Dev       Date:  2002-11-01       Impact factor: 11.361

3.  5' exon interactions within the human spliceosome establish a framework for exon junction complex structure and assembly.

Authors:  Vienna L Reichert; Hervé Le Hir; Melissa S Jurica; Melissa J Moore
Journal:  Genes Dev       Date:  2002-11-01       Impact factor: 11.361

4.  Plk1-mediated phosphorylation of UAP56 regulates the stability of UAP56.

Authors:  Fuyin Xiong; Yanli Lin; Zhengbin Han; Gengshou Shi; Liyuan Tian; Xiaojie Wu; Qiangcheng Zeng; Yanrong Zhou; Jixian Deng; Hongxing Chen
Journal:  Mol Biol Rep       Date:  2011-06-03       Impact factor: 2.316

5.  Cotranscriptional recruitment of the serine-arginine-rich (SR)-like proteins Gbp2 and Hrb1 to nascent mRNA via the TREX complex.

Authors:  Ed Hurt; Ming-Juan Luo; Susanne Röther; Robin Reed; Katja Strässer
Journal:  Proc Natl Acad Sci U S A       Date:  2004-02-09       Impact factor: 11.205

6.  p68 RNA helicase is an essential human splicing factor that acts at the U1 snRNA-5' splice site duplex.

Authors:  Zhi-Ren Liu
Journal:  Mol Cell Biol       Date:  2002-08       Impact factor: 4.272

7.  Biochemical analysis of TREX complex recruitment to intronless and intron-containing yeast genes.

Authors:  Katharine Compton Abruzzi; Scott Lacadie; Michael Rosbash
Journal:  EMBO J       Date:  2004-06-10       Impact factor: 11.598

8.  DEAH-box ATPase Prp16 has dual roles in remodeling of the spliceosome in catalytic steps.

Authors:  Chi-Kang Tseng; Hsueh-Lien Liu; Soo-Chen Cheng
Journal:  RNA       Date:  2010-11-22       Impact factor: 4.942

9.  Crystal structure of the human ATP-dependent splicing and export factor UAP56.

Authors:  Hang Shi; Olivier Cordin; C Michael Minder; Patrick Linder; Rui-Ming Xu
Journal:  Proc Natl Acad Sci U S A       Date:  2004-12-07       Impact factor: 11.205

10.  An influenza virus replicon system in yeast identified Tat-SF1 as a stimulatory host factor for viral RNA synthesis.

Authors:  Tadasuke Naito; Yoshihiko Kiyasu; Kenji Sugiyama; Ayumi Kimura; Ryosuke Nakano; Akio Matsukage; Kyosuke Nagata
Journal:  Proc Natl Acad Sci U S A       Date:  2007-11-08       Impact factor: 11.205

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