Literature DB >> 12547772

Ising model of cardiac thin filament activation with nearest-neighbor cooperative interactions.

John Jeremy Rice1, Gustavo Stolovitzky, Yuhai Tu, Pieter P de Tombe.   

Abstract

We have developed a model of cardiac thin filament activation using an Ising model approach from equilibrium statistical physics. This model explicitly represents nearest-neighbor interactions between 26 troponin/tropomyosin units along a one-dimensional array that represents the cardiac thin filament. With transition rates chosen to match experimental data, the results show that the resulting force-pCa (F-pCa) relations are similar to Hill functions with asymmetries, as seen in experimental data. Specifically, Hill plots showing (log(F/(1-F)) vs. log [Ca]) reveal a steeper slope below the half activation point (Ca(50)) compared with above. Parameter variation studies show interplay of parameters that affect the apparent cooperativity and asymmetry in the F-pCa relations. The model also predicts that Ca binding is uncooperative for low [Ca], becomes steeper near Ca(50), and becomes uncooperative again at higher [Ca]. The steepness near Ca(50) mirrors the steep F-pCa as a result of thermodynamic considerations. The model also predicts that the correlation between troponin/tropomyosin units along the one-dimensional array quickly decays at high and low [Ca], but near Ca(50), high correlation occurs across the whole array. This work provides a simple model that can account for the steepness and shape of F-pCa relations that other models fail to reproduce.

Keywords:  NASA Discipline Cardiopulmonary; NASA Program Biomedical Research and Countermeasures; Non-NASA Center

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Year:  2003        PMID: 12547772      PMCID: PMC1302668          DOI: 10.1016/S0006-3495(03)74907-8

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  25 in total

1.  Theoretical model for the cooperative equilibrium binding of myosin subfragment 1 to the actin-troponin-tropomyosin complex.

Authors:  T L Hill; E Eisenberg; L Greene
Journal:  Proc Natl Acad Sci U S A       Date:  1980-06       Impact factor: 11.205

2.  Cooperative activation in cardiac muscle: impact of sarcomere length.

Authors:  David P Dobesh; John P Konhilas; Pieter P de Tombe
Journal:  Am J Physiol Heart Circ Physiol       Date:  2002-03       Impact factor: 4.733

3.  Polymerizability of rabbit skeletal tropomyosin: effects of enzymic and chemical modifications.

Authors:  P Johnson; L B Smillie
Journal:  Biochemistry       Date:  1977-05-17       Impact factor: 3.162

4.  Alterations in the Ca2+ sensitivity of tension development by single skeletal muscle fibers at stretched lengths.

Authors:  R L Moss; A E Swinford; M L Greaser
Journal:  Biophys J       Date:  1983-07       Impact factor: 4.033

5.  Cooperativity of the calcium switch of regulated rabbit actomyosin system.

Authors:  J M Murray; A Weber
Journal:  Mol Cell Biochem       Date:  1981-02-26       Impact factor: 3.396

6.  Can the binding of Ca2+ to two regulatory sites on troponin C determine the steep pCa/tension relationship of skeletal muscle?

Authors:  P W Brandt; R N Cox; M Kawai
Journal:  Proc Natl Acad Sci U S A       Date:  1980-08       Impact factor: 11.205

7.  Effect of rigor and cycling cross-bridges on the structure of troponin C and on the Ca2+ affinity of the Ca2+-specific regulatory sites in skinned rabbit psoas fibers.

Authors:  K Güth; J D Potter
Journal:  J Biol Chem       Date:  1987-10-05       Impact factor: 5.157

8.  Effect of length and cross-bridge attachment on Ca2+ binding to cardiac troponin C.

Authors:  P A Hofmann; F Fuchs
Journal:  Am J Physiol       Date:  1987-07

9.  Kinetic studies of the cooperative binding of subfragment 1 to regulated actin.

Authors:  K M Trybus; E W Taylor
Journal:  Proc Natl Acad Sci U S A       Date:  1980-12       Impact factor: 11.205

10.  The effects of partial extraction of TnC upon the tension-pCa relationship in rabbit skinned skeletal muscle fibers.

Authors:  R L Moss; G G Giulian; M L Greaser
Journal:  J Gen Physiol       Date:  1985-10       Impact factor: 4.086

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  27 in total

Review 1.  Multi-scale computational models of familial hypertrophic cardiomyopathy: genotype to phenotype.

Authors:  Stuart G Campbell; Andrew D McCulloch
Journal:  J R Soc Interface       Date:  2011-08-10       Impact factor: 4.118

2.  Contributions of Ca2+-Independent Thin Filament Activation to Cardiac Muscle Function.

Authors:  Yasser Aboelkassem; Jordan A Bonilla; Kimberly J McCabe; Stuart G Campbell
Journal:  Biophys J       Date:  2015-11-17       Impact factor: 4.033

3.  β-adrenergic effects on cardiac myofilaments and contraction in an integrated rabbit ventricular myocyte model.

Authors:  Jorge A Negroni; Stefano Morotti; Elena C Lascano; Aldrin V Gomes; Eleonora Grandi; José L Puglisi; Donald M Bers
Journal:  J Mol Cell Cardiol       Date:  2015-02-25       Impact factor: 5.000

Review 4.  The Ca 2+ leak paradox and rogue ryanodine receptors: SR Ca 2+ efflux theory and practice.

Authors:  Eric A Sobie; Silvia Guatimosim; Leticia Gómez-Viquez; Long-Sheng Song; Hali Hartmann; M Saleet Jafri; W J Lederer
Journal:  Prog Biophys Mol Biol       Date:  2005-07-18       Impact factor: 3.667

5.  Approximate model of cooperative activation and crossbridge cycling in cardiac muscle using ordinary differential equations.

Authors:  John Jeremy Rice; Fei Wang; Donald M Bers; Pieter P de Tombe
Journal:  Biophys J       Date:  2008-01-30       Impact factor: 4.033

6.  The nonequilibrium mechanism for ultrasensitivity in a biological switch: sensing by Maxwell's demons.

Authors:  Yuhai Tu
Journal:  Proc Natl Acad Sci U S A       Date:  2008-08-07       Impact factor: 11.205

7.  Slowed Dynamics of Thin Filament Regulatory Units Reduces Ca2+-Sensitivity of Cardiac Biomechanical Function.

Authors:  Campion K P Loong; Aya K Takeda; Myriam A Badr; Jordan S Rogers; P Bryant Chase
Journal:  Cell Mol Bioeng       Date:  2013-06-01       Impact factor: 2.321

8.  A new myofilament contraction model with ATP consumption for ventricular cell model.

Authors:  Yuttamol Muangkram; Akinori Noma; Akira Amano
Journal:  J Physiol Sci       Date:  2017-08-02       Impact factor: 2.781

9.  Approximation for Cooperative Interactions of a Spatially-Detailed Cardiac Sarcomere Model.

Authors:  Takumi Washio; Jun-Ichi Okada; Seiryo Sugiura; Toshiaki Hisada
Journal:  Cell Mol Bioeng       Date:  2011-12-28       Impact factor: 2.321

Review 10.  Myofilament length dependent activation.

Authors:  Pieter P de Tombe; Ryan D Mateja; Kittipong Tachampa; Younss Ait Mou; Gerrie P Farman; Thomas C Irving
Journal:  J Mol Cell Cardiol       Date:  2010-01-04       Impact factor: 5.000

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