Literature DB >> 12547511

Gene conversion drives GC content evolution in mammalian histones.

Nicolas Galtier1.   

Abstract

To examine the evolutionary influence of gene conversion on DNA base composition, I analysed an exhaustive dataset of histone paralogous genes from human and mouse. I show that those gene copies that belong to subfamilies of very similar sequences (presumably undergoing gene conversion) have a higher GC content than unique gene copies (presumably not undergoing gene conversion). Thus, it seems that gene conversion is a biased process that tends to increase the DNA GC content, a conclusion that has implications for the evolution of isochores in vertebrates.

Entities:  

Mesh:

Substances:

Year:  2003        PMID: 12547511     DOI: 10.1016/s0168-9525(02)00002-1

Source DB:  PubMed          Journal:  Trends Genet        ISSN: 0168-9525            Impact factor:   11.639


  60 in total

1.  Weak selection and recent mutational changes influence polymorphic synonymous mutations in humans.

Authors:  Josep M Comeron
Journal:  Proc Natl Acad Sci U S A       Date:  2006-04-21       Impact factor: 11.205

2.  DNA helix: the importance of being GC-rich.

Authors:  Alexander E Vinogradov
Journal:  Nucleic Acids Res       Date:  2003-04-01       Impact factor: 16.971

3.  Contrasting GC-content dynamics across 33 mammalian genomes: relationship with life-history traits and chromosome sizes.

Authors:  Jonathan Romiguier; Vincent Ranwez; Emmanuel J P Douzery; Nicolas Galtier
Journal:  Genome Res       Date:  2010-06-07       Impact factor: 9.043

4.  GC-biased segregation of noncoding polymorphisms in Drosophila.

Authors:  Nicolas Galtier; Eric Bazin; Nicolas Bierne
Journal:  Genetics       Date:  2005-09-12       Impact factor: 4.562

5.  GC content evolution of the human and mouse genomes: insights from the study of processed pseudogenes in regions of different recombination rates.

Authors:  Adel Khelifi; Julien Meunier; Laurent Duret; Dominique Mouchiroud
Journal:  J Mol Evol       Date:  2006-04-28       Impact factor: 2.395

6.  Intragenic spatial patterns of codon usage bias in prokaryotic and eukaryotic genomes.

Authors:  Hong Qin; Wei Biao Wu; Josep M Comeron; Martin Kreitman; Wen-Hsiung Li
Journal:  Genetics       Date:  2004-12       Impact factor: 4.562

7.  Extensive concerted evolution of rice paralogs and the road to regaining independence.

Authors:  Xiyin Wang; Haibao Tang; John E Bowers; Frank A Feltus; Andrew H Paterson
Journal:  Genetics       Date:  2007-11       Impact factor: 4.562

8.  Evolutionary genomics: A positive becomes a negative.

Authors:  Laurence D Hurst
Journal:  Nature       Date:  2009-01-29       Impact factor: 49.962

9.  The correlation between recombination rate and dinucleotide bias in Drosophila melanogaster.

Authors:  Guoqing Liu; Hong Li
Journal:  J Mol Evol       Date:  2008-09-17       Impact factor: 2.395

10.  The evolutionary rate of duplicated genes under concerted evolution.

Authors:  Shuhei Mano; Hideki Innan
Journal:  Genetics       Date:  2008-08-30       Impact factor: 4.562

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.