Literature DB >> 12533491

Chromosomal arm replacement in Streptomyces griseus.

Tetsuya Uchida1, Mariko Miyawaki, Haruyasu Kinashi.   

Abstract

UV irradiation of Streptomyces griseus 2247 yielded a new chromosomal deletion mutant, MM9. Restriction and sequencing analysis revealed that homologous recombination between two similar lipoprotein-like open reading frames, which are located 450 and 250 kb from the left and right ends, respectively, caused chromosomal arm replacement. As a result, new 450-kb terminal inverted repeats (TIRs) were formed in place of the original 24-kb TIRs. Frequent homologous recombinations in Streptomyces strains suggest that telomere deletions can usually be repaired by recombinational DNA repair functioning between the intact and deleted TIR sequences on the same chromosome.

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Year:  2003        PMID： 12533491      PMCID： PMC142817          DOI： 10.1128/JB.185.3.1120-1124.2003

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  21 in total

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Authors:  D Kameoka; A Lezhava; H Zenitani; K Hiratsu; M Kawamoto; K Goshi; K Inada; H Shinkawa; H Kinashi
Journal:  J Bacteriol       Date:  1999-09       Impact factor: 3.490

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Journal:  J Bacteriol       Date:  2002-04       Impact factor: 3.490

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Authors:  M C Yang; R Losick
Journal:  J Bacteriol       Date:  2001-09       Impact factor: 3.490

Review 4.  Invertrons, a class of structurally and functionally related genetic elements that includes linear DNA plasmids, transposable elements, and genomes of adeno-type viruses.

Authors:  K Sakaguchi
Journal:  Microbiol Rev       Date:  1990-03

5.  Separation of large DNA molecules by contour-clamped homogeneous electric fields.

Authors:  G Chu; D Vollrath; R W Davis
Journal:  Science       Date:  1986-12-19       Impact factor: 47.728

6.  Complete genome sequence of the model actinomycete Streptomyces coelicolor A3(2).

Authors:  S D Bentley; K F Chater; A-M Cerdeño-Tárraga; G L Challis; N R Thomson; K D James; D E Harris; M A Quail; H Kieser; D Harper; A Bateman; S Brown; G Chandra; C W Chen; M Collins; A Cronin; A Fraser; A Goble; J Hidalgo; T Hornsby; S Howarth; C-H Huang; T Kieser; L Larke; L Murphy; K Oliver; S O'Neil; E Rabbinowitsch; M-A Rajandream; K Rutherford; S Rutter; K Seeger; D Saunders; S Sharp; R Squares; S Squares; K Taylor; T Warren; A Wietzorrek; J Woodward; B G Barrell; J Parkhill; D A Hopwood
Journal:  Nature       Date:  2002-05-09       Impact factor: 49.962

7.  Cloning and analysis of the telomere and terminal inverted repeat of the linear chromosome of Streptomyces griseus.

Authors:  Kohei Goshi; Tetsuya Uchida; Alexander Lezhava; Masayuki Yamasaki; Keiichiro Hiratsu; Hidenori Shinkawa; Haruyasu Kinashi
Journal:  J Bacteriol       Date:  2002-06       Impact factor: 3.490

8.  Survival mechanisms for Streptomyces linear replicons after telomere damage.

Authors:  Zhongjun Qin; Stanley N Cohen
Journal:  Mol Microbiol       Date:  2002-08       Impact factor: 3.501

9.  The chromosomal DNA of Streptomyces lividans 66 is linear.

Authors:  Y S Lin; H M Kieser; D A Hopwood; C W Chen
Journal:  Mol Microbiol       Date:  1993-12       Impact factor: 3.501

10.  The Streptomyces lividans 66 chromosome contains a 1 MB deletogenic region flanked by two amplifiable regions.

Authors:  M Redenbach; F Flett; W Piendl; I Glocker; U Rauland; O Wafzig; R Kliem; P Leblond; J Cullum
Journal:  Mol Gen Genet       Date:  1993-11
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  9 in total

1.  Intraspecific variability of the terminal inverted repeats of the linear chromosome of Streptomyces ambofaciens.

Authors:  Frédéric Choulet; Alexandre Gallois; Bertrand Aigle; Sophie Mangenot; Claude Gerbaud; Chantal Truong; François-Xavier Francou; Frédéric Borges; Céline Fourrier; Michel Guérineau; Bernard Decaris; Valérie Barbe; Jean-Luc Pernodet; Pierre Leblond
Journal:  J Bacteriol       Date:  2006-09       Impact factor: 3.490

2.  Chromosomal instability in Streptomyces avermitilis: major deletion in the central region and stable circularized chromosome.

Authors:  Wei Chen; Fei He; Xiaojuan Zhang; Zhi Chen; Ying Wen; Jilun Li
Journal:  BMC Microbiol       Date:  2010-07-26       Impact factor: 3.605

3.  Two chimeric chromosomes of Streptomyces coelicolor A3(2) generated by single crossover of the wild-type chromosome and linear plasmid scp1.

Authors:  Masayuki Yamasaki; Haruyasu Kinashi
Journal:  J Bacteriol       Date:  2004-10       Impact factor: 3.490

4.  Circularized chromosome with a large palindromic structure in Streptomyces griseus mutants.

Authors:  Tetsuya Uchida; Naoto Ishihara; Hiroyuki Zenitani; Keiichiro Hiratsu; Haruyasu Kinashi
Journal:  J Bacteriol       Date:  2004-06       Impact factor: 3.490

5.  Tropheryma whipplei Twist: a human pathogenic Actinobacteria with a reduced genome.

Authors:  Didier Raoult; Hiroyuki Ogata; Stephane Audic; Catherine Robert; Karsten Suhre; Michel Drancourt; Jean-Michel Claverie
Journal:  Genome Res       Date:  2003-08       Impact factor: 9.043

6.  Massive Gene Flux Drives Genome Diversity between Sympatric Streptomyces Conspecifics.

Authors:  Abdoul-Razak Tidjani; Jean-Noël Lorenzi; Maxime Toussaint; Erwin van Dijk; Delphine Naquin; Olivier Lespinet; Cyril Bontemps; Pierre Leblond
Journal:  mBio       Date:  2019-09-03       Impact factor: 7.867

7.  The genome sequence of Streptomyces rochei 7434AN4, which carries a linear chromosome and three characteristic linear plasmids.

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Journal:  Sci Rep       Date:  2019-07-29       Impact factor: 4.379

8.  Multiple and Variable NHEJ-Like Genes Are Involved in Resistance to DNA Damage in Streptomyces ambofaciens.

Authors:  Grégory Hoff; Claire Bertrand; Lingli Zhang; Emilie Piotrowski; Ludovic Chipot; Cyril Bontemps; Fabrice Confalonieri; Stephen McGovern; François Lecointe; Annabelle Thibessard; Pierre Leblond
Journal:  Front Microbiol       Date:  2016-11-28       Impact factor: 5.640

9.  Genome plasticity is governed by double strand break DNA repair in Streptomyces.

Authors:  Grégory Hoff; Claire Bertrand; Emilie Piotrowski; Annabelle Thibessard; Pierre Leblond
Journal:  Sci Rep       Date:  2018-03-27       Impact factor: 4.379
  9 in total

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