Literature DB >> 12029061

Cloning and analysis of the telomere and terminal inverted repeat of the linear chromosome of Streptomyces griseus.

Kohei Goshi1, Tetsuya Uchida, Alexander Lezhava, Masayuki Yamasaki, Keiichiro Hiratsu, Hidenori Shinkawa, Haruyasu Kinashi.   

Abstract

Cloning and sequencing of the telomere of Streptomyces griseus revealed five palindromic sequences in the terminal 116 nucleotides, all of which can make a hairpin loop structure. However, the end sequence cannot form the foldback secondary structure that is common in Streptomyces telomeres and is suggested to be necessary for terminal replication. Both inside ends of the terminal inverted repeat (TIR) were also cloned and sequenced. The results confirmed the size of the TIR to be 24 kb and identified two almost identical open reading frames that might have been involved in the formation of the TIR.

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Year:  2002        PMID: 12029061      PMCID: PMC135112          DOI: 10.1128/JB.184.12.3411-3415.2002

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  23 in total

1.  Nucleotide sequence of the S-2 mitochondrial DNA from the S cytoplasm of maize.

Authors:  C S Levings; R R Sederoff
Journal:  Proc Natl Acad Sci U S A       Date:  1983-07       Impact factor: 11.205

2.  Physical map of the linear chromosome of Streptomyces griseus.

Authors:  A Lezhava; T Mizukami; T Kajitani; D Kameoka; M Redenbach; H Shinkawa; O Nimi; H Kinashi
Journal:  J Bacteriol       Date:  1995-11       Impact factor: 3.490

3.  Replication at the telomeres of the Streptomyces linear plasmid pSLA2.

Authors:  Z Qin; S N Cohen
Journal:  Mol Microbiol       Date:  1998-06       Impact factor: 3.501

4.  Chromosomal deletions in Streptomyces griseus that remove the afsA locus.

Authors:  A Lezhava; D Kameoka; H Sugino; K Goshi; H Shinkawa; O Nimi; S Horinouchi; T Beppu; H Kinashi
Journal:  Mol Gen Genet       Date:  1997-01-27

Review 5.  Sheared purine x purine pairing in biology.

Authors:  S H Chou; L Zhu; B R Reid
Journal:  J Mol Biol       Date:  1997-04-18       Impact factor: 5.469

6.  Chromosomal arm replacement generates a high level of intraspecific polymorphism in the terminal inverted repeats of the linear chromosomal DNA of Streptomyces ambofaciens.

Authors:  G Fischer; T Wenner; B Decaris; P Leblond
Journal:  Proc Natl Acad Sci U S A       Date:  1998-11-24       Impact factor: 11.205

7.  Recombination between the linear plasmid pPZG101 and the linear chromosome of Streptomyces rimosus can lead to exchange of ends.

Authors:  S Pandza; G Biuković; A Paravić; A Dadbin; J Cullum; D Hranueli
Journal:  Mol Microbiol       Date:  1998-06       Impact factor: 3.501

8.  The terminal structures of linear plasmids from Rhodococcus opacus.

Authors:  J Kalkus; R Menne; M Reh; H G Schlegel
Journal:  Microbiology       Date:  1998-05       Impact factor: 2.777

9.  The conjugative plasmid SLP2 of Streptomyces lividans is a 50 kb linear molecule.

Authors:  C W Chen; T W Yu; Y S Lin; H M Kieser; D A Hopwood
Journal:  Mol Microbiol       Date:  1993-03       Impact factor: 3.501

10.  The 387 kb linear plasmid pPZG101 of Streptomyces rimosus and its interactions with the chromosome.

Authors:  B Gravius; D Glocker; J Pigac; K Pandza; D Hranueli; J Cullum
Journal:  Microbiology (Reading)       Date:  1994-09       Impact factor: 2.777

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  17 in total

1.  Streptomyces telomeres contain a promoter.

Authors:  Yuh-ru Lin; Mi-Young Hahn; Jung-Hye Roe; Tzu-Wen Huang; Hsiu-Hui Tsai; Yung-Feng Lin; Tsung-Sheng Su; Yu-Jiun Chan; Carton W Chen
Journal:  J Bacteriol       Date:  2008-12-05       Impact factor: 3.490

2.  Molecular characterization of Antarctic actinobacteria and screening for antimicrobial metabolite production.

Authors:  Learn-Han Lee; Yoke-Kqueen Cheah; Shiran Mohd Sidik; Nurul-Syakima Ab Mutalib; Yi-Li Tang; Hai-Peng Lin; Kui Hong
Journal:  World J Microbiol Biotechnol       Date:  2012-02-15       Impact factor: 3.312

3.  Diversity of telomere palindromic sequences and replication genes among Streptomyces linear plasmids.

Authors:  Ran Zhang; Yong Yang; Ping Fang; Chenglin Jiang; Lihua Xu; Yingmin Zhu; Meijuan Shen; Haiyang Xia; Jianfu Zhao; Tongbin Chen; Zhongjun Qin
Journal:  Appl Environ Microbiol       Date:  2006-09       Impact factor: 4.792

4.  Two internal origins of replication in Streptomyces linear plasmid pFRL1.

Authors:  Ran Zhang; Shiyuan Peng; Zhongjun Qin
Journal:  Appl Environ Microbiol       Date:  2010-07-02       Impact factor: 4.792

5.  Identification and characterization of a pSLA2 plasmid locus required for linear DNA replication and circular plasmid stable inheritance in Streptomyces lividans.

Authors:  Zhongjun Qin; Meijuan Shen; Stanley N Cohen
Journal:  J Bacteriol       Date:  2003-11       Impact factor: 3.490

6.  Chromosomal arm replacement in Streptomyces griseus.

Authors:  Tetsuya Uchida; Mariko Miyawaki; Haruyasu Kinashi
Journal:  J Bacteriol       Date:  2003-02       Impact factor: 3.490

7.  Two chimeric chromosomes of Streptomyces coelicolor A3(2) generated by single crossover of the wild-type chromosome and linear plasmid scp1.

Authors:  Masayuki Yamasaki; Haruyasu Kinashi
Journal:  J Bacteriol       Date:  2004-10       Impact factor: 3.490

8.  Genome sequence of the streptomycin-producing microorganism Streptomyces griseus IFO 13350.

Authors:  Yasuo Ohnishi; Jun Ishikawa; Hirofumi Hara; Hirokazu Suzuki; Miwa Ikenoya; Haruo Ikeda; Atsushi Yamashita; Masahira Hattori; Sueharu Horinouchi
Journal:  J Bacteriol       Date:  2008-03-28       Impact factor: 3.490

9.  Circularized chromosome with a large palindromic structure in Streptomyces griseus mutants.

Authors:  Tetsuya Uchida; Naoto Ishihara; Hiroyuki Zenitani; Keiichiro Hiratsu; Haruyasu Kinashi
Journal:  J Bacteriol       Date:  2004-06       Impact factor: 3.490

10.  Linear Streptomyces plasmids form superhelical circles through interactions between their terminal proteins.

Authors:  Hsiu-Hui Tsai; Chih-Hung Huang; Ingrid Tessmer; Dorothy A Erie; Carton W Chen
Journal:  Nucleic Acids Res       Date:  2010-11-24       Impact factor: 16.971

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