Literature DB >> 12524370

Context dependence of meiotic recombination hotspots in yeast: the relationship between recombination activity of a reporter construct and base composition.

Thomas D Petes1, Jason D Merker.   

Abstract

Borde and colleagues reported that a reporter plasmid inserted at different genomic locations in Saccharomyces cerevisiae had different levels of meiotic recombination activity. We show that the level of recombination activity is very significantly correlated with the GC content of DNA sequences flanking the insertion.

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Year:  2002        PMID: 12524370      PMCID: PMC1462354     

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  15 in total

1.  Long-range sequence composition mirrors linkage disequilibrium pattern in a 1.13 Mb region of human chromosome 22.

Authors:  I Eisenbarth; A M Striebel; E Moschgath; W Vogel; G Assum
Journal:  Hum Mol Genet       Date:  2001-11-15       Impact factor: 6.150

Review 2.  Meiotic recombination hot spots and cold spots.

Authors:  T D Petes
Journal:  Nat Rev Genet       Date:  2001-05       Impact factor: 53.242

3.  Does recombination improve selection on codon usage? Lessons from nematode and fly complete genomes.

Authors:  G Marais; D Mouchiroud; L Duret
Journal:  Proc Natl Acad Sci U S A       Date:  2001-04-24       Impact factor: 11.205

4.  Transcription factors are required for the meiotic recombination hotspot at the HIS4 locus in Saccharomyces cerevisiae.

Authors:  M A White; M Dominska; T D Petes
Journal:  Proc Natl Acad Sci U S A       Date:  1993-07-15       Impact factor: 11.205

5.  A promoter deletion reduces the rate of mitotic, but not meiotic, recombination at the HIS4 locus in yeast.

Authors:  M A White; P Detloff; M Strand; T D Petes
Journal:  Curr Genet       Date:  1992-02       Impact factor: 3.886

6.  Meiosis-induced double-strand break sites determined by yeast chromatin structure.

Authors:  T C Wu; M Lichten
Journal:  Science       Date:  1994-01-28       Impact factor: 47.728

7.  The Tn3 beta-lactamase gene acts as a hotspot for meiotic recombination in yeast.

Authors:  A Stapleton; T D Petes
Journal:  Genetics       Date:  1991-01       Impact factor: 4.562

8.  Recombination and mammalian genome evolution.

Authors:  A Eyre-Walker
Journal:  Proc Biol Sci       Date:  1993-06-22       Impact factor: 5.349

9.  Integrating genomics, bioinformatics, and classical genetics to study the effects of recombination on genome evolution.

Authors:  John A Birdsell
Journal:  Mol Biol Evol       Date:  2002-07       Impact factor: 16.240

10.  Factors that affect the location and frequency of meiosis-induced double-strand breaks in Saccharomyces cerevisiae.

Authors:  T C Wu; M Lichten
Journal:  Genetics       Date:  1995-05       Impact factor: 4.562

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  27 in total

1.  A neutral explanation for the correlation of diversity with recombination rates in humans.

Authors:  Ines Hellmann; Ingo Ebersberger; Susan E Ptak; Svante Pääbo; Molly Przeworski
Journal:  Am J Hum Genet       Date:  2003-05-08       Impact factor: 11.025

2.  A test of the CoHR motif associated with meiotic double-strand breaks in Saccharomyces cerevisiae.

Authors:  Stuart J Haring; Lucas J Lautner; Josep M Comeron; Robert E Malone
Journal:  EMBO Rep       Date:  2004-01       Impact factor: 8.807

3.  Differential activation of M26-containing meiotic recombination hot spots in Schizosaccharomyces pombe.

Authors:  David W Pryce; Alexander Lorenz; Julia B Smirnova; Josef Loidl; Ramsay J McFarlane
Journal:  Genetics       Date:  2005-03-02       Impact factor: 4.562

4.  Variation in crossing-over rates across chromosome 4 of Arabidopsis thaliana reveals the presence of meiotic recombination "hot spots".

Authors:  Jan Drouaud; Christine Camilleri; Pierre-Yves Bourguignon; Aurélie Canaguier; Aurélie Bérard; Daniel Vezon; Sandra Giancola; Dominique Brunel; Vincent Colot; Bernard Prum; Hadi Quesneville; Christine Mézard
Journal:  Genome Res       Date:  2005-12-12       Impact factor: 9.043

5.  Conservation of recombination hotspots in yeast.

Authors:  Isheng J Tsai; Austin Burt; Vassiliki Koufopanou
Journal:  Proc Natl Acad Sci U S A       Date:  2010-04-12       Impact factor: 11.205

6.  Analysis of close stable homolog juxtaposition during meiosis in mutants of Saccharomyces cerevisiae.

Authors:  Doris Y Lui; Tamara L Peoples-Holst; Joshua Chang Mell; Hsin-Yen Wu; Eric W Dean; Sean M Burgess
Journal:  Genetics       Date:  2006-04-30       Impact factor: 4.562

Review 7.  PRDM9 and Its Role in Genetic Recombination.

Authors:  Kenneth Paigen; Petko M Petkov
Journal:  Trends Genet       Date:  2018-01-21       Impact factor: 11.639

8.  Probing the Potential Role of Non-B DNA Structures at Yeast Meiosis-Specific DNA Double-Strand Breaks.

Authors:  Rucha Kshirsagar; Krishnendu Khan; Mamata V Joshi; Ramakrishna V Hosur; K Muniyappa
Journal:  Biophys J       Date:  2017-05-23       Impact factor: 4.033

9.  Patterns of heteroduplex formation associated with the initiation of meiotic recombination in the yeast Saccharomyces cerevisiae.

Authors:  Jason D Merker; Margaret Dominska; Thomas D Petes
Journal:  Genetics       Date:  2003-09       Impact factor: 4.562

10.  Comparative recombination rates in the rat, mouse, and human genomes.

Authors:  Michael I Jensen-Seaman; Terrence S Furey; Bret A Payseur; Yontao Lu; Krishna M Roskin; Chin-Fu Chen; Michael A Thomas; David Haussler; Howard J Jacob
Journal:  Genome Res       Date:  2004-04       Impact factor: 9.043

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