Literature DB >> 12524336

SPN1, a conserved gene identified by suppression of a postrecruitment-defective yeast TATA-binding protein mutant.

Julie A Fischbeck1, Susan M Kraemer, Laurie A Stargell.   

Abstract

Little is known about TATA-binding protein (TBP) functions after recruitment to the TATA element, although several TBP mutants display postrecruitment defects. Here we describe a genetic screen for suppressors of a postrecruitment-defective TBP allele. Suppression was achieved by a single point mutation in a previously uncharacterized Saccharomyces cerevisiae gene, SPN1 (suppresses postrecruitment functions gene number 1). SPN1 is an essential yeast gene that is highly conserved throughout evolution. The suppressing mutation in SPN1 substitutes an asparagine for an invariant lysine at position 192 (spn1(K192N)). The spn1(K192N) strain is able to suppress additional alleles of TBP that possess postrecruitment defects, but not a TBP allele that is postrecruitment competent. In addition, Spn1p does not stably associate with TFIID in vivo. Cells containing the spn1(K192N) allele exhibit a temperature-sensitive phenotype and some defects in activated transcription, whereas constitutive transcription appears relatively robust in the mutant background. Consistent with an important role in postrecruitment functions, transcription from the CYC1 promoter, which has been shown to be regulated by postrecruitment mechanisms, is enhanced in spn1(K192N) cells. Moreover, we find that SPN1 is a member of the SPT gene family, further supporting a functional requirement for the SPN1 gene product in transcriptional processes.

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Year:  2002        PMID: 12524336      PMCID: PMC1462358     

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  55 in total

1.  Enhancement of TBP binding by activators and general transcription factors.

Authors:  X Y Li; A Virbasius; X Zhu; M R Green
Journal:  Nature       Date:  1999-06-10       Impact factor: 49.962

2.  Spt16-Pob3 and the HMG protein Nhp6 combine to form the nucleosome-binding factor SPN.

Authors:  T Formosa; P Eriksson; J Wittmeyer; J Ginn; Y Yu; D J Stillman
Journal:  EMBO J       Date:  2001-07-02       Impact factor: 11.598

3.  Functional organization of the yeast proteome by systematic analysis of protein complexes.

Authors:  Anne-Claude Gavin; Markus Bösche; Roland Krause; Paola Grandi; Martina Marzioch; Andreas Bauer; Jörg Schultz; Jens M Rick; Anne-Marie Michon; Cristina-Maria Cruciat; Marita Remor; Christian Höfert; Malgorzata Schelder; Miro Brajenovic; Heinz Ruffner; Alejandro Merino; Karin Klein; Manuela Hudak; David Dickson; Tatjana Rudi; Volker Gnau; Angela Bauch; Sonja Bastuck; Bettina Huhse; Christina Leutwein; Marie-Anne Heurtier; Richard R Copley; Angela Edelmann; Erich Querfurth; Vladimir Rybin; Gerard Drewes; Manfred Raida; Tewis Bouwmeester; Peer Bork; Bertrand Seraphin; Bernhard Kuster; Gitte Neubauer; Giulio Superti-Furga
Journal:  Nature       Date:  2002-01-10       Impact factor: 49.962

4.  Direct and selective binding of an acidic transcriptional activation domain to the TATA-box factor TFIID.

Authors:  K F Stringer; C J Ingles; J Greenblatt
Journal:  Nature       Date:  1990-06-28       Impact factor: 49.962

5.  Isolation of the gene encoding the yeast TATA binding protein TFIID: a gene identical to the SPT15 suppressor of Ty element insertions.

Authors:  S Hahn; S Buratowski; P A Sharp; L Guarente
Journal:  Cell       Date:  1989-09-22       Impact factor: 41.582

6.  Ctr9, Rtf1, and Leo1 are components of the Paf1/RNA polymerase II complex.

Authors:  Cherie L Mueller; Judith A Jaehning
Journal:  Mol Cell Biol       Date:  2002-04       Impact factor: 4.272

7.  High-resolution localization of Drosophila Spt5 and Spt6 at heat shock genes in vivo: roles in promoter proximal pausing and transcription elongation.

Authors:  E D Andrulis; E Guzmán; P Döring; J Werner; J T Lis
Journal:  Genes Dev       Date:  2000-10-15       Impact factor: 11.361

8.  Transcription activator interactions with multiple SWI/SNF subunits.

Authors:  Kristen E Neely; Ahmed H Hassan; Christine E Brown; LeAnn Howe; Jerry L Workman
Journal:  Mol Cell Biol       Date:  2002-03       Impact factor: 4.272

9.  A deletion that includes the signal peptidase cleavage site impairs processing, glycosylation, and secretion of cell surface yeast acid phosphatase.

Authors:  R Haguenauer-Tsapis; A Hinnen
Journal:  Mol Cell Biol       Date:  1984-12       Impact factor: 4.272

10.  Activation of yeast RNA polymerase II transcription by a thymidine-rich upstream element in vitro.

Authors:  N F Lue; A R Buchman; R D Kornberg
Journal:  Proc Natl Acad Sci U S A       Date:  1989-01       Impact factor: 11.205

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  21 in total

1.  Noncanonical tandem SH2 enables interaction of elongation factor Spt6 with RNA polymerase II.

Authors:  Marie-Laure Diebold; Erin Loeliger; Michael Koch; Fred Winston; Jean Cavarelli; Christophe Romier
Journal:  J Biol Chem       Date:  2010-10-06       Impact factor: 5.157

2.  Structure and biological importance of the Spn1-Spt6 interaction, and its regulatory role in nucleosome binding.

Authors:  Seth M McDonald; Devin Close; Hua Xin; Tim Formosa; Christopher P Hill
Journal:  Mol Cell       Date:  2010-11-25       Impact factor: 17.970

3.  Crystallization and preliminary crystallographic analysis of eukaryotic transcription and mRNA export factor Iws1 from Encephalitozoon cuniculi.

Authors:  Michael Koch; Marie Laure Diebold; Jean Cavarelli; Christophe Romier
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2010-01-28

4.  The structure of an Iws1/Spt6 complex reveals an interaction domain conserved in TFIIS, Elongin A and Med26.

Authors:  Marie-Laure Diebold; Michael Koch; Erin Loeliger; Vincent Cura; Fred Winston; Jean Cavarelli; Christophe Romier
Journal:  EMBO J       Date:  2010-11-05       Impact factor: 11.598

Review 5.  Chromatin and transcription in yeast.

Authors:  Oliver J Rando; Fred Winston
Journal:  Genetics       Date:  2012-02       Impact factor: 4.562

6.  Mapping and functional characterization of the TAF11 interaction with TFIIA.

Authors:  M M Robinson; G Yatherajam; R T Ranallo; A Bric; M R Paule; L A Stargell
Journal:  Mol Cell Biol       Date:  2005-02       Impact factor: 4.272

7.  The conserved elongation factor Spn1 is required for normal transcription, histone modifications, and splicing in Saccharomyces cerevisiae.

Authors:  Natalia I Reim; James Chuang; Dhawal Jain; Burak H Alver; Peter J Park; Fred Winston
Journal:  Nucleic Acids Res       Date:  2020-10-09       Impact factor: 16.971

8.  Spt6 is required for heterochromatic silencing in the fission yeast Schizosaccharomyces pombe.

Authors:  Christine M Kiely; Samuel Marguerat; Jennifer F Garcia; Hiten D Madhani; Jürg Bähler; Fred Winston
Journal:  Mol Cell Biol       Date:  2011-08-15       Impact factor: 4.272

9.  High nitrogen insensitive 9 (HNI9)-mediated systemic repression of root NO3- uptake is associated with changes in histone methylation.

Authors:  Thomas Widiez; El Sayed El Kafafi; Thomas Girin; Alexandre Berr; Sandrine Ruffel; Gabriel Krouk; Alice Vayssières; Wen-Hui Shen; Gloria M Coruzzi; Alain Gojon; Marc Lepetit
Journal:  Proc Natl Acad Sci U S A       Date:  2011-07-25       Impact factor: 11.205

10.  Activation of a poised RNAPII-dependent promoter requires both SAGA and mediator.

Authors:  Sarah K Lee; Aaron G L Fletcher; Lei Zhang; Xu Chen; Julie A Fischbeck; Laurie A Stargell
Journal:  Genetics       Date:  2010-01-04       Impact factor: 4.562

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