Literature DB >> 12517843

Multicenter evaluation of the performance characteristics of the NucliSens HIV-1 QT assay used for quantitation of human immunodeficiency virus type 1 RNA.

Christine C Ginocchio1, Marti Kemper, Kathleen A Stellrecht, Donald J Witt.   

Abstract

The analytical performance of the NucliSens HIV-1 QT assay, a highly sensitive test based on nucleic acid sequence-based amplification technology, was evaluated in a multicenter trial. Assay specificity was evaluated with 502 plasma (EDTA) specimens from human immunodeficiency virus type 1 (HIV-1)-seronegative volunteer donors. No HIV-1 RNA was reported in any of the donor specimens. Analytical sensitivity and reproducibility were estimated with panels prepared from a high-titer well-characterized HIV-1 RNA stock (5.84 x 10(8) RNA copies/ml). The assay's dynamic range was linear from 10(6) to 10(1) HIV-1 RNA copies, with a lower detectable limit of 25 copies/ml and a 95% detection rate of 176 copies/ml. Sensitivity of the assay to detect HIV-1 RNA in clinical specimens from patients (n = 101) and in commercially available or prepared panels (n = 24) was compared with NASBA HIV-1 RNA QT (an earlier version of NucliSens HIV-1 QT) and with the Food and Drug Administration-approved standard and ultrasensitive AMPLICOR HIV-1 MONITOR, version 1.0, assays. Detection of HIV-1 RNA was reproducible over a 5-log range (mean standard deviation = 0.15 log). The NucliSens and the standard AMPLICOR assays were equivalent in detection of HIV-1 RNA (concentration, 10(3) to 10(5) copies/ml) in 57 clinical specimens. The NucliSens assay was more sensitive in detecting HIV-1 RNA at lower concentrations (</=10(2) copies/ml) (44 of 44) than either the standard AMPLICOR test (12 of 19) or the NASBA assay (10 of 25). A 25% increase in HIV-1 RNA detection frequency with panels was observed with the NucliSens assay (23 of 24) compared with the standard AMPLICOR test (17 of 24). The new assay was highly specific and demonstrated good sensitivity with a broad linear dynamic range.

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Year:  2003        PMID: 12517843      PMCID: PMC149580          DOI: 10.1128/JCM.41.1.164-173.2003

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  24 in total

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Journal:  J Virol Methods       Date:  1991-12       Impact factor: 2.014

Review 3.  Antiretroviral therapy in adults: updated recommendations of the International AIDS Society-USA Panel.

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Authors:  D J Witt; M Kemper; A Stead; C C Ginocchio; A M Caliendo
Journal:  J Clin Microbiol       Date:  2000-01       Impact factor: 5.948

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Journal:  Eur J Clin Microbiol Infect Dis       Date:  1999-04       Impact factor: 3.267

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Authors:  D Brambilla; P S Reichelderfer; J W Bremer; D E Shapiro; R C Hershow; D A Katzenstein; S M Hammer; B Jackson; A C Collier; R S Sperling; M G Fowler; R W Coombs
Journal:  AIDS       Date:  1999-11-12       Impact factor: 4.177

8.  Performance characteristics of the QUANTIPLEX HIV-1 RNA 3.0 assay for detection and quantitation of human immunodeficiency virus type 1 RNA in plasma.

Authors:  A Erice; D Brambilla; J Bremer; J B Jackson; R Kokka; B Yen-Lieberman; R W Coombs
Journal:  J Clin Microbiol       Date:  2000-08       Impact factor: 5.948

9.  Quantification of HIV-1 RNA in plasma using NASBA during HIV-1 primary infection.

Authors:  B van Gemen; T Kievits; R Schukkink; D van Strijp; L T Malek; R Sooknanan; H G Huisman; P Lens
Journal:  J Virol Methods       Date:  1993-07       Impact factor: 2.014

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Authors:  X Wei; S K Ghosh; M E Taylor; V A Johnson; E A Emini; P Deutsch; J D Lifson; S Bonhoeffer; M A Nowak; B H Hahn
Journal:  Nature       Date:  1995-01-12       Impact factor: 49.962

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  7 in total

1.  Theoretical design and analysis of multivolume digital assays with wide dynamic range validated experimentally with microfluidic digital PCR.

Authors:  Jason E Kreutz; Todd Munson; Toan Huynh; Feng Shen; Wenbin Du; Rustem F Ismagilov
Journal:  Anal Chem       Date:  2011-10-07       Impact factor: 6.986

Review 2.  Advances in developing HIV-1 viral load assays for resource-limited settings.

Authors:  ShuQi Wang; Feng Xu; Utkan Demirci
Journal:  Biotechnol Adv       Date:  2010-07-01       Impact factor: 14.227

3.  Performance of three commercial viral load assays, Versant human immunodeficiency virus type 1 (HIV-1) RNA bDNA v3.0, Cobas AmpliPrep/Cobas TaqMan HIV-1, and NucliSens HIV-1 EasyQ v1.2, testing HIV-1 non-B subtypes and recombinant variants.

Authors:  Africa Holguín; Marisa López; Mar Molinero; Vincent Soriano
Journal:  J Clin Microbiol       Date:  2008-07-02       Impact factor: 5.948

4.  Real-time NASBA detection of SARS-associated coronavirus and comparison with real-time reverse transcription-PCR.

Authors:  Maria Cristina Keightley; Peter Sillekens; Wim Schippers; Charles Rinaldo; Kirsten St George
Journal:  J Med Virol       Date:  2005-12       Impact factor: 2.327

Review 5.  Current and Future Perspectives on Isothermal Nucleic Acid Amplification Technologies for Diagnosing Infections.

Authors:  Godwin Attah Obande; Kirnpal Kaur Banga Singh
Journal:  Infect Drug Resist       Date:  2020-02-12       Impact factor: 4.003

6.  Comparison of the real-time nucleic acid sequence-based amplification (RTi-NASBA) with conventional NASBA, and galactomannan assay for the diagnosis of invasive aspergillosis.

Authors:  Jin Hong Yoo; Su Mi Choi; Dong Gun Lee; Sun Hee Park; Jung Hyun Choi; Eun Young Kwon; Wan Shik Shin
Journal:  J Korean Med Sci       Date:  2007-08       Impact factor: 2.153

7.  Life beyond PCR: alternative target amplification technologies for the diagnosis of infectious diseases, part I.

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Journal:  Clin Microbiol Newsl       Date:  2004-08-11
  7 in total

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