Literature DB >> 12486009

The splicing regulator TIA-1 interacts with U1-C to promote U1 snRNP recruitment to 5' splice sites.

Patrik Förch1, Oscar Puig, Concepción Martínez, Bertrand Séraphin, Juan Valcárcel.   

Abstract

The U1 small nuclear ribonucleoprotein (U1 snRNP) binds to the pre-mRNA 5' splice site (ss) at early stages of spliceosome assembly. Recruitment of U1 to a class of weak 5' ss is promoted by binding of the protein TIA-1 to uridine-rich sequences immediately downstream from the 5' ss. Here we describe a molecular dissection of the activities of TIA-1. RNA recognition motifs (RRMs) 2 and 3 are necessary and sufficient for binding to the pre-mRNA. The non- consensus RRM1 and the C-terminal glutamine-rich (Q) domain are required for association with U1 snRNP and to facilitate its recruitment to 5' ss. Co-precipitation experiments revealed a specific and direct interaction involving the N-terminal region of the U1 protein U1-C and the Q-rich domain of TIA-1, an interaction enhanced by RRM1. The results argue that binding of TIA-1 in the vicinity of a 5' ss helps to stabilize U1 snRNP recruitment, at least in part, via a direct interaction with U1-C, thus providing one molecular mechanism for the function of this splicing regulator.

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Year:  2002        PMID: 12486009      PMCID: PMC139089          DOI: 10.1093/emboj/cdf668

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  69 in total

1.  Arrangement of RNA and proteins in the spliceosomal U1 small nuclear ribonucleoprotein particle.

Authors:  H Stark; P Dube; R Lührmann; B Kastner
Journal:  Nature       Date:  2001-01-25       Impact factor: 49.962

2.  Yeast U1 snRNP-pre-mRNA complex formation without U1snRNA-pre-mRNA base pairing.

Authors:  H Du; M Rosbash
Journal:  RNA       Date:  2001-01       Impact factor: 4.942

Review 3.  Spliceosomal UsnRNP biogenesis, structure and function.

Authors:  C L Will; R Lührmann
Journal:  Curr Opin Cell Biol       Date:  2001-06       Impact factor: 8.382

4.  The RNA-binding protein TIA-1 is a novel mammalian splicing regulator acting through intron sequences adjacent to a 5' splice site.

Authors:  F Del Gatto-Konczak; C F Bourgeois; C Le Guiner; L Kister; M C Gesnel; J Stévenin; R Breathnach
Journal:  Mol Cell Biol       Date:  2000-09       Impact factor: 4.272

5.  A monoclonal antibody reactive with a 15-kDa cytoplasmic granule-associated protein defines a subpopulation of CD8+ T lymphocytes.

Authors:  P Anderson; C Nagler-Anderson; C O'Brien; H Levine; S Watkins; H S Slayter; M L Blue; S F Schlossman
Journal:  J Immunol       Date:  1990-01-15       Impact factor: 5.422

6.  Identification of functional U1 snRNA-pre-mRNA complexes committed to spliceosome assembly and splicing.

Authors:  B Seraphin; M Rosbash
Journal:  Cell       Date:  1989-10-20       Impact factor: 41.582

7.  An early hierarchic role of U1 small nuclear ribonucleoprotein in spliceosome assembly.

Authors:  S W Ruby; J Abelson
Journal:  Science       Date:  1988-11-18       Impact factor: 47.728

8.  Mapping of B cell epitopes on small nuclear ribonucleoproteins that react with human autoantibodies as well as with experimentally-induced mouse monoclonal antibodies.

Authors:  W J Habets; M H Hoet; B A De Jong; A Van der Kemp; W J Van Venrooij
Journal:  J Immunol       Date:  1989-10-15       Impact factor: 5.422

9.  Identification of the RNA binding segment of human U1 A protein and definition of its binding site on U1 snRNA.

Authors:  D Scherly; W Boelens; W J van Venrooij; N A Dathan; J Hamm; I W Mattaj
Journal:  EMBO J       Date:  1989-12-20       Impact factor: 11.598

10.  Selection of alternative 5' splice sites: role of U1 snRNP and models for the antagonistic effects of SF2/ASF and hnRNP A1.

Authors:  I C Eperon; O V Makarova; A Mayeda; S H Munroe; J F Cáceres; D G Hayward; A R Krainer
Journal:  Mol Cell Biol       Date:  2000-11       Impact factor: 4.272

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  115 in total

1.  U1 snRNP-dependent function of TIAR in the regulation of alternative RNA processing of the human calcitonin/CGRP pre-mRNA.

Authors:  Hui Zhu; Robert A Hasman; Katherine M Young; Nancy L Kedersha; Hua Lou
Journal:  Mol Cell Biol       Date:  2003-09       Impact factor: 4.272

2.  RBFOX2 promotes protein 4.1R exon 16 selection via U1 snRNP recruitment.

Authors:  Shu-Ching Huang; Alexander C Ou; Jennie Park; Faye Yu; Brian Yu; Angela Lee; Guang Yang; Anyu Zhou; Edward J Benz
Journal:  Mol Cell Biol       Date:  2011-11-14       Impact factor: 4.272

3.  Splicing regulation in spinal muscular atrophy by an RNA structure formed by long-distance interactions.

Authors:  Natalia N Singh; Brian M Lee; Ravindra N Singh
Journal:  Ann N Y Acad Sci       Date:  2015-02-27       Impact factor: 5.691

4.  T-Cell Intracellular Antigens and Hu Antigen R Antagonistically Modulate Mitochondrial Activity and Dynamics by Regulating Optic Atrophy 1 Gene Expression.

Authors:  Isabel Carrascoso; José Alcalde; Carmen Sánchez-Jiménez; Paloma González-Sánchez; José M Izquierdo
Journal:  Mol Cell Biol       Date:  2017-08-11       Impact factor: 4.272

5.  TIA1 prevents skipping of a critical exon associated with spinal muscular atrophy.

Authors:  Natalia N Singh; Joonbae Seo; Eric W Ottesen; Maria Shishimorova; Dhruva Bhattacharya; Ravindra N Singh
Journal:  Mol Cell Biol       Date:  2010-12-28       Impact factor: 4.272

6.  Arabidopsis CBF5 interacts with the H/ACA snoRNP assembly factor NAF1.

Authors:  Inna Lermontova; Veit Schubert; Frederik Börnke; Jiri Macas; Ingo Schubert
Journal:  Plant Mol Biol       Date:  2007-08-22       Impact factor: 4.076

7.  Polypyrimidine tract binding protein blocks the 5' splice site-dependent assembly of U2AF and the prespliceosomal E complex.

Authors:  Shalini Sharma; Arnold M Falick; Douglas L Black
Journal:  Mol Cell       Date:  2005-08-19       Impact factor: 17.970

8.  A systematic analysis of intronic sequences downstream of 5' splice sites reveals a widespread role for U-rich motifs and TIA1/TIAL1 proteins in alternative splicing regulation.

Authors:  Isabel Aznarez; Yoseph Barash; Ofer Shai; David He; Julian Zielenski; Lap-Chee Tsui; John Parkinson; Brendan J Frey; Johanna M Rommens; Benjamin J Blencowe
Journal:  Genome Res       Date:  2008-05-02       Impact factor: 9.043

9.  Novel splicing factor RBM25 modulates Bcl-x pre-mRNA 5' splice site selection.

Authors:  Anyu Zhou; Alexander C Ou; Aeri Cho; Edward J Benz; Shu-Ching Huang
Journal:  Mol Cell Biol       Date:  2008-07-28       Impact factor: 4.272

Review 10.  Mechanisms of alternative splicing regulation: insights from molecular and genomics approaches.

Authors:  Mo Chen; James L Manley
Journal:  Nat Rev Mol Cell Biol       Date:  2009-09-23       Impact factor: 94.444

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