Literature DB >> 12482867

Differential regulation of a hyperthermophilic alpha-amylase with a novel (Ca,Zn) two-metal center by zinc.

Anni Linden1, Olga Mayans, Wolfram Meyer-Klaucke, Garabed Antranikian, Matthias Wilmanns.   

Abstract

The crystal structure of the alpha-amylase from the hyperthermophilic archaeon Pyrococcus woesei was solved in the presence of three inhibitors: acarbose, Tris, and zinc. In the absence of exogenous metals, this alpha-amylase bound 1 and 4 molar eq of zinc and calcium, respectively. The structure reveals a novel, activating, two-metal (Ca,Zn)-binding site and a second inhibitory zinc-binding site that is found in the -1 sugar-binding pocket within the active site. The data resolve the apparent paradox between the zinc requirement for catalytic activity and its strong inhibitory effect when added in molar excess. They provide a rationale as to why this alpha-amylase, in contrast to commercially available alpha-amylases, does not require the addition of metal ions for full catalytic activity, suggesting it as an ideal target to maximize the efficiency of industrial processes like liquefaction of starch.

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Year:  2002        PMID: 12482867     DOI: 10.1074/jbc.M211339200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  21 in total

1.  Sequence fingerprints of enzyme specificities from the glycoside hydrolase family GH57.

Authors:  Karol Blesák; Stefan Janeček
Journal:  Extremophiles       Date:  2012-04-22       Impact factor: 2.395

2.  Three-dimensional structure of RBcel1, a metagenome-derived psychrotolerant family GH5 endoglucanase.

Authors:  Maud Delsaute; Renaud Berlemont; Dominique Dehareng; Dany Van Elder; Moreno Galleni; Cédric Bauvois
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2013-07-26

3.  The hyperthermophilic α-amylase from Thermococcus sp. HJ21 does not require exogenous calcium for thermostability because of high-binding affinity to calcium.

Authors:  Huaixu Cheng; Zhidan Luo; Mingsheng Lu; Song Gao; Shujun Wang
Journal:  J Microbiol       Date:  2017-03-01       Impact factor: 3.422

Review 4.  α-Amylase: an enzyme specificity found in various families of glycoside hydrolases.

Authors:  Štefan Janeček; Birte Svensson; E Ann MacGregor
Journal:  Cell Mol Life Sci       Date:  2013-06-27       Impact factor: 9.261

5.  4,6-α-glucanotransferase, a novel enzyme that structurally and functionally provides an evolutionary link between glycoside hydrolase enzyme families 13 and 70.

Authors:  Slavko Kralj; Pieter Grijpstra; Sander S van Leeuwen; Hans Leemhuis; Justyna M Dobruchowska; Rachel M van der Kaaij; Amarila Malik; Ariyanti Oetari; Johannis P Kamerling; Lubbert Dijkhuizen
Journal:  Appl Environ Microbiol       Date:  2011-09-23       Impact factor: 4.792

6.  New insight in the structural features of haloadaptation in α-amylases from halophilic Archaea following homology modeling strategy: folded and stable conformation maintained through low hydrophobicity and highly negative charged surface.

Authors:  Mohamed Amine Zorgani; Kevin Patron; Mickaël Desvaux
Journal:  J Comput Aided Mol Des       Date:  2014-05-28       Impact factor: 3.686

Review 7.  Remarkable evolutionary relatedness among the enzymes and proteins from the α-amylase family.

Authors:  Štefan Janeček; Marek Gabriško
Journal:  Cell Mol Life Sci       Date:  2016-05-06       Impact factor: 9.261

8.  Cloning and expression of islandisin, a new thermostable subtilisin from Fervidobacterium islandicum, in Escherichia coli.

Authors:  Carolin Gödde; Kerstin Sahm; Stan J J Brouns; Leon D Kluskens; John van der Oost; Willem M de Vos; Garabed Antranikian
Journal:  Appl Environ Microbiol       Date:  2005-07       Impact factor: 4.792

9.  A new GH13 subfamily represented by the α-amylase from the halophilic archaeon Haloarcula hispanica.

Authors:  Štefan Janeček; Barbora Zámocká
Journal:  Extremophiles       Date:  2019-11-16       Impact factor: 2.395

10.  Altered large-ring cyclodextrin product profile due to a mutation at Tyr-172 in the amylomaltase of Corynebacterium glutamicum.

Authors:  Wiraya Srisimarat; Jarunee Kaulpiboon; Kuakarun Krusong; Wolfgang Zimmermann; Piamsook Pongsawasdi
Journal:  Appl Environ Microbiol       Date:  2012-08-03       Impact factor: 4.792

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