Literature DB >> 12455643

Reduced volume PCR amplification reactions using the AmpFlSTR Profiler Plus kit.

Michelle L Gaines1, Patrick W Wojtkiewicz, Jennifer A Valentine, Connie L Brown.   

Abstract

The forensic community continues to seek improvements in DNA typing methods on aspects such as sensitivity and efficacy. Reducing the volume of the AmpFlSTR Profiler Plus reagents offered greater sensitivity and improved the chance of obtaining useful results for samples with very low quantities of DNA and multiple source samples. On the downside, amplifications initiated with less than 0.4 ng of DNA exhibited a twofold increase in the standard deviation of peak ratios. This research suggested a twofold approach to analyzing samples. For samples with greater than 0.25 ng of DNA, a 25 microL reaction is appropriate. Samples that did not demonstrate quantifiable results, or that have less than 0.25 ng, can be amplified by drying the sample directly in the PCR tube and amplifying in a 5 microL reaction. The analyst can expect at least limited results with as little as 0.03 ng of DNA in the 5 microL reaction.

Mesh:

Year:  2002        PMID: 12455643

Source DB:  PubMed          Journal:  J Forensic Sci        ISSN: 0022-1198            Impact factor:   1.832


  7 in total

1.  Low-volume amplification on chemically structured chips using the PowerPlex16 DNA amplification kit.

Authors:  Ulrike Schmidt; Sabine Lutz-Bonengel; Hans-Joachim Weisser; Timo Sänger; Stefan Pollak; Ulrike Schön; Thomas Zacher; Wolfgang Mann
Journal:  Int J Legal Med       Date:  2005-10-18       Impact factor: 2.686

2.  Low volume amplification and sequencing of mitochondrial DNA on a chemically structured chip.

Authors:  Sabine Lutz-Bonengel; Timo Sänger; Marielle Heinrich; Ulrike Schön; Ulrike Schmidt
Journal:  Int J Legal Med       Date:  2006-11-09       Impact factor: 2.686

3.  Reduced reaction volumes and increased Taq DNA polymerase concentration improve STR profiling outcomes from a real-world low template DNA source: telogen hairs.

Authors:  Dennis McNevin; Janette Edson; James Robertson; Jeremy J Austin
Journal:  Forensic Sci Med Pathol       Date:  2015-05-22       Impact factor: 2.007

Review 4.  Validity of low copy number typing and applications to forensic science.

Authors:  Bruce Budowle; Arthur J Eisenberg; Angela van Daal
Journal:  Croat Med J       Date:  2009-06       Impact factor: 1.351

5.  Consensus and pool profiles to assist in the analysis and interpretation of complex low template DNA mixtures.

Authors:  Corina Benschop; Hinda Haned; Titia Sijen
Journal:  Int J Legal Med       Date:  2011-12-01       Impact factor: 2.686

6.  Forensic trace DNA: a review.

Authors:  Roland Ah van Oorschot; Kaye N Ballantyne; R John Mitchell
Journal:  Investig Genet       Date:  2010-12-01

7.  High-Throughput Miniaturized 16S rRNA Amplicon Library Preparation Reduces Costs while Preserving Microbiome Integrity.

Authors:  Jeremiah J Minich; Greg Humphrey; Rodolfo A S Benitez; Jon Sanders; Austin Swafford; Eric E Allen; Rob Knight
Journal:  mSystems       Date:  2018-11-06       Impact factor: 6.496

  7 in total

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