Literature DB >> 12432963

Epigenomics: genome-wide study of methylation phenomena.

K L Novik1, I Nimmrich, B Genc, S Maier, C Piepenbrock, A Olek, S Beck.   

Abstract

Epigenetics is one of the key areas of future research that can elucidate how genomes work. It combines genetics and the environment to address complex biological systems such as the plasticity of our genome. While all nucleated human cells carry the same genome, they express different genes at different times. Much of this is governed by epigenetic changes resulting in differential methylation of our genome--or different epigenomes. Individual studies over the past decades have already established the involvement of DNA methylation in imprinting, gene regulation, chromatin structure, genome stability and disease, especially cancer. Now, in the wake of the Human Genome Project (HGP), epigenetic phenomena can be studied genome-wide and are giving rise to a new field, epigenomics. Here, we review the current and future potential of this field and introduce the pilot study towards the Human Epigenome Project (HEP).

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Year:  2002        PMID: 12432963

Source DB:  PubMed          Journal:  Curr Issues Mol Biol        ISSN: 1467-3037            Impact factor:   2.081


  28 in total

1.  Analysis and accurate quantification of CpG methylation by MALDI mass spectrometry.

Authors:  Jörg Tost; Philipp Schatz; Matthias Schuster; Kurt Berlin; Ivo Glynne Gut
Journal:  Nucleic Acids Res       Date:  2003-05-01       Impact factor: 16.971

2.  Early demethylation of non-CpG, CpC-rich, elements in the myogenin 5'-flanking region: a priming effect on the spreading of active demethylation.

Authors:  Andrea Fuso; Giampiero Ferraguti; Francesco Grandoni; Raffaella Ruggeri; Sigfrido Scarpa; Roberto Strom; Marco Lucarelli
Journal:  Cell Cycle       Date:  2010-10-29       Impact factor: 4.534

3.  Quantitative DNA methylation analysis: the promise of high-throughput epigenomic diagnostic testing in human neoplastic disease.

Authors:  William B Coleman; Ashley G Rivenbark
Journal:  J Mol Diagn       Date:  2006-05       Impact factor: 5.568

4.  A genome-wide analysis of CpG dinucleotides in the human genome distinguishes two distinct classes of promoters.

Authors:  Serge Saxonov; Paul Berg; Douglas L Brutlag
Journal:  Proc Natl Acad Sci U S A       Date:  2006-01-23       Impact factor: 11.205

Review 5.  Applying whole-genome studies of epigenetic regulation to study human disease.

Authors:  J D Lieb; S Beck; M L Bulyk; P Farnham; N Hattori; S Henikoff; X S Liu; K Okumura; K Shiota; T Ushijima; J M Greally
Journal:  Cytogenet Genome Res       Date:  2006       Impact factor: 1.636

Review 6.  Regulation and misregulation of Eph/ephrin expression.

Authors:  Dina N Arvanitis; Alice Davy
Journal:  Cell Adh Migr       Date:  2012-03-01       Impact factor: 3.405

Review 7.  PTSD and gene variants: new pathways and new thinking.

Authors:  Kelly Skelton; Kerry J Ressler; Seth D Norrholm; Tanja Jovanovic; Bekh Bradley-Davino
Journal:  Neuropharmacology       Date:  2011-02-26       Impact factor: 5.250

Review 8.  The landscape for epigenetic/epigenomic biomedical resources.

Authors:  Kabita Shakya; Mary J O'Connell; Heather J Ruskin
Journal:  Epigenetics       Date:  2012-08-09       Impact factor: 4.528

9.  Intergenerational transmission of trauma effects: putative role of epigenetic mechanisms.

Authors:  Rachel Yehuda; Amy Lehrner
Journal:  World Psychiatry       Date:  2018-10       Impact factor: 49.548

Review 10.  Epigenetic impact of curcumin on stroke prevention.

Authors:  Anuradha Kalani; Pradip K Kamat; Komal Kalani; Neetu Tyagi
Journal:  Metab Brain Dis       Date:  2014-05-01       Impact factor: 3.584

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