Literature DB >> 12406707

A new species of Devosia that forms a unique nitrogen-fixing root-nodule symbiosis with the aquatic legume Neptunia natans (L.f.) druce.

Raul Rivas1, Encarna Velázquez, Anne Willems, Nieves Vizcaíno, Nanjappa S Subba-Rao, Pedro F Mateos, Monique Gillis, Frank B Dazzo, Eustoquio Martínez-Molina.   

Abstract

Rhizobia are the common bacterial symbionts that form nitrogen-fixing root nodules in legumes. However, recently other bacteria have been shown to nodulate and fix nitrogen symbiotically with these plants. Neptunia natans is an aquatic legume indigenous to tropical and subtropical regions and in African soils is nodulated by Allorhizobium undicola. This legume develops an unusual root-nodule symbiosis on floating stems in aquatic environments through a unique infection process. Here, we analyzed the low-molecular-weight RNA and 16S ribosomal DNA (rDNA) sequence of the same fast-growing isolates from India that were previously used to define the developmental morphology of the unique infection process in this symbiosis with N. natans and found that they are phylogenetically located in the genus Devosia, not Allorhizobium or RHIZOBIUM: The 16S rDNA sequences of these two Neptunia-nodulating Devosia strains differ from the only species currently described in that genus, Devosia riboflavina. From the same isolated colonies, we also located their nodD and nifH genes involved in nodulation and nitrogen fixation on a plasmid of approximately 170 kb. Sequence analysis showed that their nodD and nifH genes are most closely related to nodD and nifH of Rhizobium tropici, suggesting that this newly described Neptunia-nodulating Devosia species may have acquired these symbiotic genes by horizontal transfer.

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Year:  2002        PMID: 12406707      PMCID: PMC129907          DOI: 10.1128/AEM.68.11.5217-5222.2002

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  24 in total

1.  Nodulation of legumes by members of the beta-subclass of Proteobacteria.

Authors:  L Moulin; A Munive; B Dreyfus; C Boivin-Masson
Journal:  Nature       Date:  2001-06-21       Impact factor: 49.962

2.  Analysis of LMW RNA profiles of Frankia strains by staircase electrophoresis.

Authors:  E Velázquez; E Cervantes; J M Igual; A Peix; P F Mateos; S Benamar; A Moiroud; C T Wheeler; J Dawson; D Labeda; C Rodríguez-Barrueco; E Martínez-Molina
Journal:  Syst Appl Microbiol       Date:  1998-12       Impact factor: 4.022

3.  Mesorhizobium chacoense sp. nov., a novel species that nodulates Prosopis alba in the Chaco Arido region (Argentina).

Authors:  E Velázquez; J M Igual; A Willems; M P Fernández; E Muñoz; P F Mateos; A Abril; N Toro; P Normand; E Cervantes; M Gillis; E Martínez-Molina
Journal:  Int J Syst Evol Microbiol       Date:  2001-05       Impact factor: 2.747

4.  Improved tools for biological sequence comparison.

Authors:  W R Pearson; D J Lipman
Journal:  Proc Natl Acad Sci U S A       Date:  1988-04       Impact factor: 11.205

5.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Authors:  N Saitou; M Nei
Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

6.  Compilation of tRNA sequences.

Authors:  M Sprinzl; J Moll; F Meissner; T Hartmann
Journal:  Nucleic Acids Res       Date:  1985       Impact factor: 16.971

7.  Ralstonia taiwanensis sp. nov., isolated from root nodules of Mimosa species and sputum of a cystic fibrosis patient.

Authors:  W M Chen; S Laevens; T M Lee; T Coenye; P De Vos; M Mergeay; P Vandamme
Journal:  Int J Syst Evol Microbiol       Date:  2001-09       Impact factor: 2.747

8.  Methylotrophic Methylobacterium bacteria nodulate and fix nitrogen in symbiosis with legumes.

Authors:  A Sy; E Giraud; P Jourand; N Garcia; A Willems; P de Lajudie; Y Prin; M Neyra; M Gillis; C Boivin-Masson; B Dreyfus
Journal:  J Bacteriol       Date:  2001-01       Impact factor: 3.490

9.  Allorhizobium undicola gen. nov., sp. nov., nitrogen-fixing bacteria that efficiently nodulate Neptunia natans in Senegal.

Authors:  P de Lajudie; E Laurent-Fulele; A Willems; U Torck; R Coopman; M D Collins; K Kersters; B Dreyfus; M Gillis
Journal:  Int J Syst Bacteriol       Date:  1998-10

10.  Transfer of "Pseudomonas riboflavina" (Foster 1944), a gram-negative, motile rod with long-chain 3-hydroxy fatty acids, to Devosia riboflavina gen. nov., sp. nov., nom. rev.

Authors:  Y Nakagawa; T Sakane; A Yokota
Journal:  Int J Syst Bacteriol       Date:  1996-01
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  45 in total

1.  Microarray-based detection and typing of the Rhizobium nodulation gene nodC: potential of DNA arrays to diagnose biological functions of interest.

Authors:  Cyril Bontemps; Geoffroy Golfier; Carine Gris-Liebe; Sébastien Carrere; Luc Talini; Catherine Boivin-Masson
Journal:  Appl Environ Microbiol       Date:  2005-12       Impact factor: 4.792

2.  Symbiotic relationships of legumes and nodule bacteria on Barro Colorado Island, Panama: a review.

Authors:  Matthew A Parker
Journal:  Microb Ecol       Date:  2008-05       Impact factor: 4.552

3.  Novel alphaproteobacterial root nodule symbiont associated with Lupinus texensis.

Authors:  Cheryl P Andam; Matthew A Parker
Journal:  Appl Environ Microbiol       Date:  2007-07-06       Impact factor: 4.792

4.  Effects of biochar-based controlled release nitrogen fertilizer on nitrogen-use efficiency of oilseed rape (Brassica napus L.).

Authors:  Jiayuan Liao; Xiangrong Liu; Ang Hu; Haixing Song; Xiuzhi Chen; Zhenhua Zhang
Journal:  Sci Rep       Date:  2020-07-06       Impact factor: 4.379

5.  A study on the prevalence of bacteria that occupy nodules within single peanut plants.

Authors:  Jorge Angelini; Fernando Ibáñez; Tania Taurian; María Laura Tonelli; Lucio Valetti; Adriana Fabra
Journal:  Curr Microbiol       Date:  2011-03-27       Impact factor: 2.188

6.  Prospecting metal-resistant plant-growth promoting rhizobacteria for rhizoremediation of metal contaminated estuaries using Spartina densiflora.

Authors:  L Andrades-Moreno; I Del Castillo; R Parra; B Doukkali; S Redondo-Gómez; P Pérez-Palacios; M A Caviedes; E Pajuelo; I D Rodríguez-Llorente
Journal:  Environ Sci Pollut Res Int       Date:  2013-11-27       Impact factor: 4.223

7.  Nodulation of Lupinus albus by strains of Ochrobactrum lupini sp. nov.

Authors:  Martha E Trujillo; Anne Willems; Adriana Abril; Ana-María Planchuelo; Raúl Rivas; Dolores Ludeña; Pedro F Mateos; Eustoquio Martínez-Molina; Encarna Velázquez
Journal:  Appl Environ Microbiol       Date:  2005-03       Impact factor: 4.792

8.  Rhizobial resource associated with epidemic legumes in Tibet.

Authors:  Bao Chao Hou; En Tao Wang; Ying Li; Rui Zong Jia; Wen Feng Chen; Chao Xin Man; Xin Hua Sui; Wen Xin Chen
Journal:  Microb Ecol       Date:  2008-06-21       Impact factor: 4.552

Review 9.  Emergence of β-rhizobia as new root nodulating bacteria in legumes and current status of the legume-rhizobium host specificity dogma.

Authors:  Ahmed Idris Hassen; Sandra C Lamprecht; Francina L Bopape
Journal:  World J Microbiol Biotechnol       Date:  2020-02-24       Impact factor: 3.312

10.  Rhizobia with different symbiotic efficiencies nodulate Acaciella angustissima in Mexico, including Sinorhizobium chiapanecum sp. nov. which has common symbiotic genes with Sinorhizobium mexicanum.

Authors:  Reiner Rincón-Rosales; Lourdes Lloret; Edith Ponce; Esperanza Martínez-Romero
Journal:  FEMS Microbiol Ecol       Date:  2009-01       Impact factor: 4.194

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