Literature DB >> 12403626

Link between protein-solvent and weak protein-protein interactions gives insight into halophilic adaptation.

Lionel Costenaro1, Giuseppe Zaccai, Christine Ebel.   

Abstract

Malate dehydrogenase (Hm MalDH) from the extreme halophile Haloarcula marismortui is a very acidic protein with extensive ion binding properties. It is a good model for the study of solvation-solubility relationships. We measured the small-angle neutron or X-ray scattering profiles of folded and stable Hm MalDH at various protein concentrations and derived the second virial coefficients A(2). In NaCl, CsCl, KF, KCl, and NaCH(3)CO(2), A(2) values are positive, indicating globally repulsive protein-protein interactions. Below 1 M MgCl(2) and MgSO(4) or above 2 M (NH(4))(2)SO(4), A(2) rapidly decreases. From structure factor modeling with DLVO (Derjaguin, Landau, Verwey, and Overbeek)-like potentials, an effective diameter of 80-82 A is found for the protein particle in solution, compatible with its structural dimensions; the effective charge of the particle is undefined because of the high salt concentration. The strong variations of the protein-protein interaction are correlated to an attractive potential whose depth evolves with the salinity but in an opposite way in Mg salts and (NH(4))(2)SO(4). A repulsive Donnan term, corresponding to counterion dissociation, and an attractive term related to previously measured preferential salt binding parameters are discussed from well-established thermodynamics considerations and qualitatively account for the behavior of the protein-protein interactions in the various solutions. Because a solvation shell with a composition different from bulk induces protein-protein attraction, molecular adaptation to high salt would be directed to allow protein-salt interactions in order to avoid water or salt enrichment at the surface of the protein and thus preserve its solubility.

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Year:  2002        PMID: 12403626     DOI: 10.1021/bi025830z

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  10 in total

1.  Three-dimensional structure of a halotolerant algal carbonic anhydrase predicts halotolerance of a mammalian homolog.

Authors:  Lakshmanane Premkumar; Harry M Greenblatt; Umesh K Bageshwar; Tatyana Savchenko; Irena Gokhman; Joel L Sussman; Ada Zamir
Journal:  Proc Natl Acad Sci U S A       Date:  2005-05-13       Impact factor: 11.205

Review 2.  Small angle neutron scattering for the study of solubilised membrane proteins.

Authors:  Cécile Breyton; Frank Gabel; Mathilde Lethier; Ali Flayhan; Grégory Durand; Jean-Michel Jault; Céline Juillan-Binard; Lionel Imbert; Martine Moulin; Stéphanie Ravaud; Michael Härtlein; Christine Ebel
Journal:  Eur Phys J E Soft Matter       Date:  2013-07-16       Impact factor: 1.890

3.  Pyrophosphate hydrolysis in the extremely halophilic archaeon Haloarcula japonica is catalyzed by a single enzyme with a broad ionic strength range.

Authors:  Satoshi Wakai; Akihiro Abe; Sotaro Fujii; Kaoru Nakasone; Yoshihiro Sambongi
Journal:  Extremophiles       Date:  2017-02-17       Impact factor: 2.395

4.  Molecular adaptation and salt stress response of Halobacterium salinarum cells revealed by neutron spectroscopy.

Authors:  Pierre Vauclare; Vincent Marty; Elisa Fabiani; Nicolas Martinez; Marion Jasnin; Frank Gabel; Judith Peters; Giuseppe Zaccai; Bruno Franzetti
Journal:  Extremophiles       Date:  2015-09-16       Impact factor: 2.395

5.  Salt-dependent studies of NADP-dependent isocitrate dehydrogenase from the halophilic archaeon Haloferax volcanii.

Authors:  Dominique Madern; Mónica Camacho; Adoración Rodríguez-Arnedo; María-José Bonete; Giuseppe Zaccai
Journal:  Extremophiles       Date:  2004-06-18       Impact factor: 2.395

6.  Kinetics of salt-dependent unfolding of [2Fe-2S] ferredoxin of Halobacterium salinarum.

Authors:  Amal K Bandyopadhyay; G Krishnamoorthy; Lakshmi C Padhy; Haripalsingh M Sonawat
Journal:  Extremophiles       Date:  2007-04-04       Impact factor: 3.035

7.  An experimental point of view on hydration/solvation in halophilic proteins.

Authors:  Romain Talon; Nicolas Coquelle; Dominique Madern; Eric Girard
Journal:  Front Microbiol       Date:  2014-02-21       Impact factor: 5.640

Review 8.  Protective role of salt in catalysis and maintaining structure of halophilic proteins against denaturation.

Authors:  Rajeshwari Sinha; Sunil K Khare
Journal:  Front Microbiol       Date:  2014-04-09       Impact factor: 5.640

9.  Flexibility of the cytoplasmic domain of the phototaxis transducer II from Natronomonas pharaonis.

Authors:  Ivan L Budyak; Olga S Mironova; Naveena Yanamala; Vijayalaxmi Manoharan; Georg Büldt; Ramona Schlesinger; Judith Klein-Seetharaman
Journal:  J Biophys       Date:  2008-10-16

10.  Surviving salt fluctuations: stress and recovery in Halobacterium salinarum, an extreme halophilic Archaeon.

Authors:  P Vauclare; F Natali; J P Kleman; G Zaccai; B Franzetti
Journal:  Sci Rep       Date:  2020-02-24       Impact factor: 4.379

  10 in total

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