Literature DB >> 15894606

Three-dimensional structure of a halotolerant algal carbonic anhydrase predicts halotolerance of a mammalian homolog.

Lakshmanane Premkumar1, Harry M Greenblatt, Umesh K Bageshwar, Tatyana Savchenko, Irena Gokhman, Joel L Sussman, Ada Zamir.   

Abstract

Protein molecular adaptation to drastically shifting salinities was studied in dCA II, an alpha-type carbonic anhydrase (EC 4.2.1.1) from the exceptionally salt-tolerant unicellular green alga Dunaliella salina. The salt-inducible, extracellular dCA II is highly salt-tolerant and thus differs from its mesophilic homologs. The crystal structure of dCA II, determined at 1.86-A resolution, is globally similar to other alpha-type carbonic anhydrases except for two extended alpha-helices and an added Na-binding loop. Its unusual electrostatic properties include a uniformly negative surface electrostatic potential of lower magnitude than that observed in the highly acidic halophilic proteins and an exceptionally low positive potential at a site adjoining the catalytic Zn(2+) compared with mesophilic homologs. The halotolerant dCA II also differs from typical halophilic proteins in retaining conformational stability and solubility in low to high salt concentrations. The crucial role of electrostatic features in dCA II halotolerance is strongly supported by the ability to predict the unanticipated halotolerance of the murine CA XIV isozyme, which was confirmed biochemically. A proposal for the functional significance of the halotolerance of CA XIV in the kidney is presented.

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Year:  2005        PMID: 15894606      PMCID: PMC1111892          DOI: 10.1073/pnas.0502829102

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  43 in total

Review 1.  Halophilic adaptation of enzymes.

Authors:  D Madern; C Ebel; G Zaccai
Journal:  Extremophiles       Date:  2000-04       Impact factor: 2.395

Review 2.  Superefficient enzymes.

Authors:  M E Stroppolo; M Falconi; A M Caccuri; A Desideri
Journal:  Cell Mol Life Sci       Date:  2001-09       Impact factor: 9.261

3.  Elucidation of factors responsible for enhanced thermal stability of proteins: a structural genomics based study.

Authors:  Suvobrata Chakravarty; Raghavan Varadarajan
Journal:  Biochemistry       Date:  2002-06-25       Impact factor: 3.162

4.  Protein folding and association: insights from the interfacial and thermodynamic properties of hydrocarbons.

Authors:  A Nicholls; K A Sharp; B Honig
Journal:  Proteins       Date:  1991

5.  Solvent interactions of halophilic malate dehydrogenase.

Authors:  Christine Ebel; Lionel Costenaro; Mihaela Pascu; Pierre Faou; Blandine Kernel; Flavien Proust-De Martin; Giuseppe Zaccai
Journal:  Biochemistry       Date:  2002-11-05       Impact factor: 3.162

6.  Contribution of long-range electrostatic interactions to the stabilization of the catalytic transition state of the serine protease subtilisin BPN'.

Authors:  S E Jackson; A R Fersht
Journal:  Biochemistry       Date:  1993-12-21       Impact factor: 3.162

7.  Expression, assay, and structure of the extracellular domain of murine carbonic anhydrase XIV: implications for selective inhibition of membrane-associated isozymes.

Authors:  Douglas A Whittington; Jeffrey H Grubb; Abdul Waheed; Gul N Shah; William S Sly; David W Christianson
Journal:  J Biol Chem       Date:  2003-12-03       Impact factor: 5.157

8.  Purification and characterisation of two extremely halotolerant xylanases from a novel halophilic bacterium.

Authors:  Peter Langborg Wejse; Kjeld Ingvorsen; Kim Kusk Mortensen
Journal:  Extremophiles       Date:  2003-07-18       Impact factor: 2.395

9.  An unusual halotolerant alpha-type carbonic anhydrase from the alga Dunaliella salina functionally expressed in Escherichia coli.

Authors:  Lakshmanane Premkumar; Umesh K Bageshwar; Irena Gokhman; Ada Zamir; Joel L Sussman
Journal:  Protein Expr Purif       Date:  2003-03       Impact factor: 1.650

10.  Insights into protein adaptation to a saturated salt environment from the crystal structure of a halophilic 2Fe-2S ferredoxin.

Authors:  F Frolow; M Harel; J L Sussman; M Mevarech; M Shoham
Journal:  Nat Struct Biol       Date:  1996-05
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  20 in total

Review 1.  Carbonic anhydrase as a model for biophysical and physical-organic studies of proteins and protein-ligand binding.

Authors:  Vijay M Krishnamurthy; George K Kaufman; Adam R Urbach; Irina Gitlin; Katherine L Gudiksen; Douglas B Weibel; George M Whitesides
Journal:  Chem Rev       Date:  2008-03       Impact factor: 60.622

Review 2.  Molecular Mechanisms of Enzyme Activation by Monovalent Cations.

Authors:  David W Gohara; Enrico Di Cera
Journal:  J Biol Chem       Date:  2016-07-26       Impact factor: 5.157

3.  Activation and thermal stabilization of a recombinant γ-glutamyltranspeptidase from Bacillus licheniformis ATCC 27811 by monovalent cations.

Authors:  Long-Liu Lin; Bo-Yuan Lu; Meng-Chun Chi; Yu-Fen Huang; Min-Guan Lin; Tzu-Fan Wang
Journal:  Appl Microbiol Biotechnol       Date:  2022-03-01       Impact factor: 4.813

4.  Structural features that govern enzymatic activity in carbonic anhydrase from a low-temperature adapted fish, Chionodraco hamatus.

Authors:  Stefano Marino; Kuniko Hayakawa; Keisuke Hatada; Maurizio Benfatto; Antonia Rizzello; Michele Maffia; Luigi Bubacco
Journal:  Biophys J       Date:  2007-06-15       Impact factor: 4.033

5.  A Shinella β-N-acetylglucosaminidase of glycoside hydrolase family 20 displays novel biochemical and molecular characteristics.

Authors:  Junpei Zhou; Zhifeng Song; Rui Zhang; Caihong Chen; Qian Wu; Junjun Li; Xianghua Tang; Bo Xu; Junmei Ding; Nanyu Han; Zunxi Huang
Journal:  Extremophiles       Date:  2017-04-21       Impact factor: 2.395

6.  An antibiotic-resistance enzyme from a deep-sea bacterium.

Authors:  Marta Toth; Clyde Smith; Hilary Frase; Shahriar Mobashery; Sergei Vakulenko
Journal:  J Am Chem Soc       Date:  2010-01-20       Impact factor: 15.419

7.  The most recently discovered carbonic anhydrase, CA XV, is expressed in the thick ascending limb of Henle and in the collecting ducts of mouse kidney.

Authors:  Sina Saari; Mika Hilvo; Peiwen Pan; Gerolf Gros; Nina Hanke; Abdul Waheed; William S Sly; Seppo Parkkila
Journal:  PLoS One       Date:  2010-03-10       Impact factor: 3.240

8.  A structurally novel salt-regulated promoter of duplicated carbonic anhydrase gene 1 from Dunaliella salina.

Authors:  Jie Li; Yumin Lu; Lexun Xue; Hua Xie
Journal:  Mol Biol Rep       Date:  2010-02       Impact factor: 2.316

9.  Characterization of a NaCl-tolerant β-N-acetylglucosaminidase from Sphingobacterium sp. HWLB1.

Authors:  Junpei Zhou; Zhifeng Song; Rui Zhang; Limei Ding; Qian Wu; Junjun Li; Xianghua Tang; Bo Xu; Junmei Ding; Nanyu Han; Zunxi Huang
Journal:  Extremophiles       Date:  2016-06-13       Impact factor: 2.395

10.  Structural basis for the aminoacid composition of proteins from halophilic archea.

Authors:  Xavier Tadeo; Blanca López-Méndez; Tamara Trigueros; Ana Laín; David Castaño; Oscar Millet
Journal:  PLoS Biol       Date:  2009-12-15       Impact factor: 8.029

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