Literature DB >> 12379744

Hematopoietic-specific activators establish an overlapping pattern of histone acetylation and methylation within a mammalian chromatin domain.

Carol M Kiekhaefer1, Jeffrey A Grass, Kirby D Johnson, Meghan E Boyer, Emery H Bresnick.   

Abstract

Posttranslational modification of histones through acetylation, methylation, and phosphorylation is a common mode of regulating chromatin structure and, therefore, diverse nuclear processes. One such modification, methylated histone H3 at lysine-4 (H3-meK4), colocalizes with hyperacetylated histones H3 and H4 in mammalian chromatin. Whereas activators directly recruit acetyltransferases, the process whereby H3-meK4 is established is unknown. We tested whether the hematopoietic-specific activators NF-E2 and GATA-1, which mediate transactivation of the beta-globin genes, induce both histone acetylation and H3-meK4. Through the use of NF-E2- and GATA-1-null cell lines, we show that both activators induce H3 acetylation at the promoter upon transcriptional activation. However, analysis of H3-mek4 revealed that NF-E2 and GATA-1 differentially regulate chromatin modifications at the betamajor promoter. NF-E2, but not GATA-1, induces H3-meK4 at the promoter. Thus, under conditions in which NF-E2 and GATA-1 activate the transcription of an endogenous gene at least 570-fold, these activators differ in their capacity to induce H3-meK4. Despite strong H3-meK4 at hypersensitive site 2 of the upstream locus control region, neither factor was required to establish H3-meK4 at this site. These results support a model in which multiple tissue-specific activators collectively function to assemble a composite histone modification pattern, consisting of overlapping histone acetylation and methylation. As GATA-1 induced H3 acetylation, but not H3-meK4, at the promoter, H3 acetylation and H3-meK4 components of a composite histone modification pattern can be established independently.

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Year:  2002        PMID: 12379744      PMCID: PMC137880          DOI: 10.1073/pnas.212389499

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  68 in total

1.  Role of histone H3 lysine 9 methylation in epigenetic control of heterochromatin assembly.

Authors:  J Nakayama ; J C Rice; B D Strahl; C D Allis; S I Grewal
Journal:  Science       Date:  2001-03-15       Impact factor: 47.728

Review 2.  Histone acetylation: a switch between repressive and permissive chromatin. Second in review series on chromatin dynamics.

Authors:  Anton Eberharter; Peter B Becker
Journal:  EMBO Rep       Date:  2002-03       Impact factor: 8.807

3.  Set9, a novel histone H3 methyltransferase that facilitates transcription by precluding histone tail modifications required for heterochromatin formation.

Authors:  Kenichi Nishioka; Sergei Chuikov; Kavitha Sarma; Hediye Erdjument-Bromage; C David Allis; Paul Tempst; Danny Reinberg
Journal:  Genes Dev       Date:  2002-02-15       Impact factor: 11.361

Review 4.  ChIPs of the beta-globin locus: unraveling gene regulation within an active domain.

Authors:  Michael Bulger; Tomoyuki Sawado; Dirk Schübeler; Mark Groudine
Journal:  Curr Opin Genet Dev       Date:  2002-04       Impact factor: 5.578

5.  Identification of a conserved erythroid specific domain of histone acetylation across the alpha-globin gene cluster.

Authors:  E Anguita; C A Johnson; W G Wood; B M Turner; D R Higgs
Journal:  Proc Natl Acad Sci U S A       Date:  2001-10-02       Impact factor: 11.205

6.  Selective recognition of methylated lysine 9 on histone H3 by the HP1 chromo domain.

Authors:  A J Bannister; P Zegerman; J F Partridge; E A Miska; J O Thomas; R C Allshire; T Kouzarides
Journal:  Nature       Date:  2001-03-01       Impact factor: 49.962

7.  Methylation of histone H3 lysine 9 creates a binding site for HP1 proteins.

Authors:  M Lachner; D O'Carroll; S Rea; K Mechtler; T Jenuwein
Journal:  Nature       Date:  2001-03-01       Impact factor: 49.962

8.  The murine beta-globin locus control region regulates the rate of transcription but not the hyperacetylation of histones at the active genes.

Authors:  D Schübeler; M Groudine; M A Bender
Journal:  Proc Natl Acad Sci U S A       Date:  2001-09-11       Impact factor: 11.205

9.  Histone deacetylase 3 associates with and represses the transcription factor GATA-2.

Authors:  Y Ozawa; M Towatari; S Tsuzuki; F Hayakawa; T Maeda; Y Miyata; M Tanimoto; H Saito
Journal:  Blood       Date:  2001-10-01       Impact factor: 22.113

10.  Correlation between histone lysine methylation and developmental changes at the chicken beta-globin locus.

Authors:  M D Litt; M Simpson; M Gaszner; C D Allis; G Felsenfeld
Journal:  Science       Date:  2001-08-09       Impact factor: 47.728

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  40 in total

1.  The c-myc insulator element and matrix attachment regions define the c-myc chromosomal domain.

Authors:  Wendy M Gombert; Stephen D Farris; Eric D Rubio; Kristin M Morey-Rosler; William H Schubach; Anton Krumm
Journal:  Mol Cell Biol       Date:  2003-12       Impact factor: 4.272

2.  Coregulator-dependent facilitation of chromatin occupancy by GATA-1.

Authors:  Saumen Pal; Alan B Cantor; Kirby D Johnson; Tyler B Moran; Meghan E Boyer; Stuart H Orkin; Emery H Bresnick
Journal:  Proc Natl Acad Sci U S A       Date:  2004-01-08       Impact factor: 11.205

3.  Formation of a tissue-specific histone acetylation pattern by the hematopoietic transcription factor GATA-1.

Authors:  Danielle L Letting; Carrie Rakowski; Mitchell J Weiss; Gerd A Blobel
Journal:  Mol Cell Biol       Date:  2003-02       Impact factor: 4.272

4.  A complex chromatin landscape revealed by patterns of nuclease sensitivity and histone modification within the mouse beta-globin locus.

Authors:  Michael Bulger; Dirk Schübeler; M A Bender; Joan Hamilton; Catherine M Farrell; Ross C Hardison; Mark Groudine
Journal:  Mol Cell Biol       Date:  2003-08       Impact factor: 4.272

5.  A paradoxical mutant GATA factor.

Authors:  M Isabel Muro-Pastor; Joseph Strauss; Ana Ramón; Claudio Scazzocchio
Journal:  Eukaryot Cell       Date:  2004-04

6.  Long-range histone acetylation of the Ifng gene is an essential feature of T cell differentiation.

Authors:  Weisong Zhou; Shaojing Chang; Thomas M Aune
Journal:  Proc Natl Acad Sci U S A       Date:  2004-02-24       Impact factor: 11.205

7.  Multiple functions of Ldb1 required for beta-globin activation during erythroid differentiation.

Authors:  Sang-Hyun Song; AeRi Kim; Tobias Ragoczy; M A Bender; Mark Groudine; Ann Dean
Journal:  Blood       Date:  2010-06-22       Impact factor: 22.113

Review 8.  Important roles of reversible acetylation in the function of hematopoietic transcription factors.

Authors:  Xiaofang Huo; Junwu Zhang
Journal:  J Cell Mol Med       Date:  2005 Jan-Mar       Impact factor: 5.310

9.  Formation of an active tissue-specific chromatin domain initiated by epigenetic marking at the embryonic stem cell stage.

Authors:  Henrietta Szutorisz; Claudia Canzonetta; Andrew Georgiou; Cheok-Man Chow; László Tora; Niall Dillon
Journal:  Mol Cell Biol       Date:  2005-03       Impact factor: 4.272

10.  An Erythroid-Specific Chromatin Opening Element Increases β-Globin Gene Expression from Integrated Retroviral Gene Transfer Vectors.

Authors:  Michael J Nemeth; Christopher H Lowrey
Journal:  Gene Ther Mol Biol       Date:  2004-12
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