Literature DB >> 12374829

The first archaeal ATP-dependent glucokinase, from the hyperthermophilic crenarchaeon Aeropyrum pernix, represents a monomeric, extremely thermophilic ROK glucokinase with broad hexose specificity.

Thomas Hansen1, Bianca Reichstein, Roland Schmid, Peter Schönheit.   

Abstract

An ATP-dependent glucokinase of the hyperthermophilic aerobic crenarchaeon Aeropyrum pernix was purified 230-fold to homogeneity. The enzyme is a monomeric protein with an apparent molecular mass of about 36 kDa. The apparent K(m) values for ATP and glucose (at 90 degrees C and pH 6.2) were 0.42 and 0.044 mM, respectively; the apparent V(max) was about 35 U/mg. The enzyme was specific for ATP as a phosphoryl donor, but showed a broad spectrum for phosphoryl acceptors: in addition to glucose, which showed the highest catalytic efficiency (k(cat)/K(m)), the enzyme also phosphorylates glucosamin, fructose, mannose, and 2-deoxyglucose. Divalent cations were required for maximal activity: Mg(2+), which was most effective, could partially be replaced with Co(2+), Mn(2+), and Ni(2+). The enzyme had a temperature optimum of at least 100 degrees C and showed significant thermostability up to 100 degrees C. The coding function of open reading frame (ORF) APE2091 (Y. Kawarabayasi, Y. Hino, H. Horikawa, S. Yamazaki, Y. Haikawa, K. Jin-no, M. Takahashi, M. Sekine, S. Baba, A. Ankai, H. Kosugi, A. Hosoyama, S. Fukui, Y. Nagai, K. Nishijima, H. Nakazawa, M. Takamiya, S. Masuda, T. Funahashi, T. Tanaka, Y. Kudoh, J. Yamazaki, N. Kushida, A. Oguchi, and H. Kikuchi, DNA Res. 6:83-101, 145-152, 1999), previously annotated as gene glk, coding for ATP-glucokinase of A. pernix, was proved by functional expression in Escherichia coli. The purified recombinant ATP-dependent glucokinase showed a 5-kDa higher molecular mass on sodium dodecyl sulfate-polyacrylamide gel electrophoresis, but almost identical kinetic and thermostability properties in comparison to the native enzyme purified from A. pernix. N-terminal amino acid sequence of the native enzyme revealed that the translation start codon is a GTG 171 bp downstream of the annotated start codon of ORF APE2091. The amino acid sequence deduced from the truncated ORF APE2091 revealed sequence similarity to members of the ROK family, which comprise bacterial sugar kinases and transcriptional repressors. This is the first report of the characterization of an ATP-dependent glucokinase from the domain of Archaea, which differs from its bacterial counterparts by its monomeric structure and its broad specificity for hexoses.

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Year:  2002        PMID: 12374829      PMCID: PMC135380          DOI: 10.1128/JB.184.21.5955-5965.2002

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  56 in total

1.  Archaeal adaptation to higher temperatures revealed by genomic sequence of Thermoplasma volcanium.

Authors:  T Kawashima; N Amano; H Koike; S Makino; S Higuchi; Y Kawashima-Ohya; K Watanabe; M Yamazaki; K Kanehori; T Kawamoto; T Nunoshiba; Y Yamamoto; H Aramaki; K Makino; M Suzuki
Journal:  Proc Natl Acad Sci U S A       Date:  2000-12-19       Impact factor: 11.205

2.  Biochemical characterization, cloning, and sequencing of ADP-dependent (AMP-forming) glucokinase from two hyperthermophilic archaea, Pyrococcus furiosus and Thermococcus litoralis.

Authors:  S Koga; I Yoshioka; H Sakuraba; M Takahashi; S Sakasegawa; S Shimizu; T Ohshima
Journal:  J Biochem       Date:  2000-12       Impact factor: 3.387

3.  Organization, promoter analysis and transcriptional regulation of the Staphylococcus xylosus xylose utilization operon.

Authors:  C Sizemore; E Buchner; T Rygus; C Witke; F Götz; W Hillen
Journal:  Mol Gen Genet       Date:  1991-07

4.  PPi-dependent phosphofructokinase from Thermoproteus tenax, an archaeal descendant of an ancient line in phosphofructokinase evolution.

Authors:  B Siebers; H P Klenk; R Hensel
Journal:  J Bacteriol       Date:  1998-04       Impact factor: 3.490

5.  Simultaneous purification and characterization of glucokinase, fructokinase and glucose-6-phosphate dehydrogenase from Zymomonas mobilis.

Authors:  R K Scopes; V Testolin; A Stoter; K Griffiths-Smith; E M Algar
Journal:  Biochem J       Date:  1985-06-15       Impact factor: 3.857

6.  Cleavage of structural proteins during the assembly of the head of bacteriophage T4.

Authors:  U K Laemmli
Journal:  Nature       Date:  1970-08-15       Impact factor: 49.962

7.  The D-allose operon of Escherichia coli K-12.

Authors:  C Kim; S Song; C Park
Journal:  J Bacteriol       Date:  1997-12       Impact factor: 3.490

8.  Aeropyrum pernix gen. nov., sp. nov., a novel aerobic hyperthermophilic archaeon growing at temperatures up to 100 degrees C.

Authors:  Y Sako; N Nomura; A Uchida; Y Ishida; H Morii; Y Koga; T Hoaki; T Maruyama
Journal:  Int J Syst Bacteriol       Date:  1996-10

9.  Structural basis for the ADP-specificity of a novel glucokinase from a hyperthermophilic archaeon.

Authors:  S Ito; S Fushinobu; I Yoshioka; S Koga; H Matsuzawa; T Wakagi
Journal:  Structure       Date:  2001-03-07       Impact factor: 5.006

10.  Characterization and regulatory properties of a single hexokinase from the citric acid accumulating fungus Aspergillus niger.

Authors:  F Steinböck; S Choojun; I Held; M Roehr; C P Kubicek
Journal:  Biochim Biophys Acta       Date:  1994-07-06
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  26 in total

Review 1.  The unique features of glycolytic pathways in Archaea.

Authors:  Corné H Verhees; Servé W M Kengen; Judith E Tuininga; Gerrit J Schut; Michael W W Adams; Willem M De Vos; John Van Der Oost
Journal:  Biochem J       Date:  2003-10-15       Impact factor: 3.857

Review 2.  How phosphotransferase system-related protein phosphorylation regulates carbohydrate metabolism in bacteria.

Authors:  Josef Deutscher; Christof Francke; Pieter W Postma
Journal:  Microbiol Mol Biol Rev       Date:  2006-12       Impact factor: 11.056

3.  Crystallization and preliminary X-ray analysis of Mlc from Escherichia coli.

Authors:  Kinga Gerber; Winfried Boos; Wolfram Welte; André Schiefner
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2005-01-08

4.  Identification and characterization of an ATP-dependent hexokinase with broad substrate specificity from the hyperthermophilic archaeon Sulfolobus tokodaii.

Authors:  Hiroshi Nishimasu; Shinya Fushinobu; Hirofumi Shoun; Takayoshi Wakagi
Journal:  J Bacteriol       Date:  2006-03       Impact factor: 3.490

Review 5.  Carbohydrate metabolism in Archaea: current insights into unusual enzymes and pathways and their regulation.

Authors:  Christopher Bräsen; Dominik Esser; Bernadette Rauch; Bettina Siebers
Journal:  Microbiol Mol Biol Rev       Date:  2014-03       Impact factor: 11.056

6.  Crystal structures of N-acetylmannosamine kinase provide insights into enzyme activity and inhibition.

Authors:  Jacobo Martinez; Long Duc Nguyen; Stephan Hinderlich; Reinhold Zimmer; Eva Tauberger; Werner Reutter; Wolfram Saenger; Hua Fan; Sébastien Moniot
Journal:  J Biol Chem       Date:  2012-02-16       Impact factor: 5.157

7.  Characterization of the RokA and HexA broad-substrate-specificity hexokinases from Bacteroides fragilis and their role in hexose and N-acetylglucosamine utilization.

Authors:  Christopher J Brigham; Michael H Malamy
Journal:  J Bacteriol       Date:  2005-02       Impact factor: 3.490

8.  Substrate recognition mechanism and substrate-dependent conformational changes of an ROK family glucokinase from Streptomyces griseus.

Authors:  Ken-ichi Miyazono; Nobumitsu Tabei; Sho Morita; Yasuo Ohnishi; Sueharu Horinouchi; Masaru Tanokura
Journal:  J Bacteriol       Date:  2011-11-18       Impact factor: 3.490

9.  Crystallization and preliminary crystallographic analysis of a putative glucokinase/hexokinase from Thermus thermophilus.

Authors:  Tsutomu Nakamura; Yasuhiro Kashima; Shouhei Mine; Takashi Oku; Koichi Uegaki
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2011-11-25

10.  Crystal structures of Escherichia coli ATP-dependent glucokinase and its complex with glucose.

Authors:  Vladimir V Lunin; Yunge Li; Joseph D Schrag; Pietro Iannuzzi; Miroslaw Cygler; Allan Matte
Journal:  J Bacteriol       Date:  2004-10       Impact factor: 3.490

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