Literature DB >> 9401019

The D-allose operon of Escherichia coli K-12.

C Kim1, S Song, C Park.   

Abstract

Escherichia coli K-12 can utilize D-allose, an all-cis hexose, as a sole carbon source. The operon responsible for D-allose metabolism was localized at 92.8 min of the E. coli linkage map. It consists of six genes, alsRBACEK, which are inducible by D-allose and are under the control of the repressor gene alsR. This operon is also subject to catabolite repression. Three genes, alsB, alsA, and alsC, appear to be necessary for transport of D-allose. D-Allose-binding protein, encoded by alsB, is a periplasmic protein that has an affinity for D-allose, with a Kd of 0.33 microM. As was found for other binding-protein-mediated ABC transporters, the allose transport system includes an ATP-binding component (AlsA) and a transmembrane protein (AlsC). It was found that AlsE (a putative D-allulose-6-phosphate 3-epimerase), but not AlsK (a putative D-allose kinase), is necessary for allose metabolism. During this study, we observed that the D-allose transporter is partially responsible for the low-affinity transport of D-ribose and that strain W3110, an E. coli prototroph, has a defect in the transport of D-allose mediated by the allose permease.

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Year:  1997        PMID: 9401019      PMCID: PMC179723          DOI: 10.1128/jb.179.24.7631-7637.1997

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  27 in total

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Authors:  A J Skinner; R A Cooper
Journal:  J Bacteriol       Date:  1974-06       Impact factor: 3.490

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Journal:  Bacteriol Rev       Date:  1972-12

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Authors:  M N Hall; T J Silhavy
Journal:  J Mol Biol       Date:  1981-09-05       Impact factor: 5.469

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Authors:  J E Lopilato; J L Garwin; S D Emr; T J Silhavy; J R Beckwith
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10.  Molecular cloning and characterization of genes required for ribose transport and utilization in Escherichia coli K-12.

Authors:  A Iida; S Harayama; T Iino; G L Hazelbauer
Journal:  J Bacteriol       Date:  1984-05       Impact factor: 3.490

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  28 in total

1.  D-Allose catabolism of Escherichia coli: involvement of alsI and regulation of als regulon expression by allose and ribose.

Authors:  T S Poulsen; Y Y Chang; B Hove-Jensen
Journal:  J Bacteriol       Date:  1999-11       Impact factor: 3.490

Review 2.  Linkage map of Escherichia coli K-12, edition 10: the traditional map.

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3.  Topology of RbsC, a membrane component of the ribose transporter, belonging to the AraH superfamily.

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4.  Beta-D-Allose inhibits fruiting body formation and sporulation in Myxococcus xanthus.

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5.  Ribose utilization with an excess of mutarotase causes cell death due to accumulation of methylglyoxal.

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7.  An automated phenotype-driven approach (GeneForce) for refining metabolic and regulatory models.

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Journal:  PLoS Comput Biol       Date:  2010-10-28       Impact factor: 4.475

8.  Genome scale reconstruction of a Salmonella metabolic model: comparison of similarity and differences with a commensal Escherichia coli strain.

Authors:  Manal AbuOun; Patrick F Suthers; Gareth I Jones; Ben R Carter; Mark P Saunders; Costas D Maranas; Martin J Woodward; Muna F Anjum
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9.  Structural basis for substrate specificity in phosphate binding (beta/alpha)8-barrels: D-allulose 6-phosphate 3-epimerase from Escherichia coli K-12.

Authors:  Kui K Chan; Alexander A Fedorov; Elena V Fedorov; Steven C Almo; John A Gerlt
Journal:  Biochemistry       Date:  2008-08-14       Impact factor: 3.162

10.  Complete genome sequence and comparative metabolic profiling of the prototypical enteroaggregative Escherichia coli strain 042.

Authors:  Roy R Chaudhuri; Mohammed Sebaihia; Jon L Hobman; Mark A Webber; Denisse L Leyton; Martin D Goldberg; Adam F Cunningham; Anthony Scott-Tucker; Paul R Ferguson; Christopher M Thomas; Gad Frankel; Christoph M Tang; Edward G Dudley; Ian S Roberts; David A Rasko; Mark J Pallen; Julian Parkhill; James P Nataro; Nicholas R Thomson; Ian R Henderson
Journal:  PLoS One       Date:  2010-01-20       Impact factor: 3.240

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