Literature DB >> 12374754

60S pre-ribosome formation viewed from assembly in the nucleolus until export to the cytoplasm.

Tracy A Nissan1, Jochen Bassler, Elisabeth Petfalski, David Tollervey, Ed Hurt.   

Abstract

60S ribosomes undergo initial assembly in the nucleolus before export to the cytoplasm and recent analyses have identified several nucleolar pre-60S particles. To unravel the steps in the pathway of ribosome formation, we have purified the pre-60S ribosomes associated with proteins predicted to act at different stages as the pre-ribosomes transit from the nucleolus through the nucleoplasm and are then exported to the cytoplasm for final maturation. About 50 non-ribosomal proteins are associated with the early nucleolar pre-60S ribosomes. During subsequent maturation and transport to the nucleoplasm, many of these factors are removed, while others remain attached and additional factors transiently associate. When the 60S precursor particles are close to exit from the nucleus they associate with at least two export factors, Nmd3 and Mtr2. As the 60S pre-ribosome reaches the cytoplasm, almost all of the factors are dissociated. These data provide an initial biochemical map of 60S ribosomal subunit formation on its path from the nucleolus to the cytoplasm.

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Year:  2002        PMID: 12374754      PMCID: PMC129079          DOI: 10.1093/emboj/cdf547

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  43 in total

1.  Nascent 60S ribosomal subunits enter the free pool bound by Nmd3p.

Authors:  J H Ho; G Kallstrom; A W Johnson
Journal:  RNA       Date:  2000-11       Impact factor: 4.942

2.  Nog2p, a putative GTPase associated with pre-60S subunits and required for late 60S maturation steps.

Authors:  C Saveanu; D Bienvenu; A Namane; P E Gleizes; N Gas; A Jacquier; M Fromont-Racine
Journal:  EMBO J       Date:  2001-11-15       Impact factor: 11.598

Review 3.  Nascent ribosomes.

Authors:  J R Warner
Journal:  Cell       Date:  2001-10-19       Impact factor: 41.582

4.  Ribosomal precursor particles from yeast.

Authors:  J Trapman; J Retèl; R J Planta
Journal:  Exp Cell Res       Date:  1975-01       Impact factor: 3.905

Review 5.  The structure and biogenesis of yeast ribosomes.

Authors:  J L Woolford
Journal:  Adv Genet       Date:  1991       Impact factor: 1.944

6.  Functional organization of the yeast proteome by systematic analysis of protein complexes.

Authors:  Anne-Claude Gavin; Markus Bösche; Roland Krause; Paola Grandi; Martina Marzioch; Andreas Bauer; Jörg Schultz; Jens M Rick; Anne-Marie Michon; Cristina-Maria Cruciat; Marita Remor; Christian Höfert; Malgorzata Schelder; Miro Brajenovic; Heinz Ruffner; Alejandro Merino; Karin Klein; Manuela Hudak; David Dickson; Tatjana Rudi; Volker Gnau; Angela Bauch; Sonja Bastuck; Bettina Huhse; Christina Leutwein; Marie-Anne Heurtier; Richard R Copley; Angela Edelmann; Erich Querfurth; Vladimir Rybin; Gerard Drewes; Manfred Raida; Tewis Bouwmeester; Peer Bork; Bertrand Seraphin; Bernhard Kuster; Gitte Neubauer; Giulio Superti-Furga
Journal:  Nature       Date:  2002-01-10       Impact factor: 49.962

7.  The course of the assembly of ribosomal subunits in yeast.

Authors:  T Kruiswijk; R J Planta; J M Krop
Journal:  Biochim Biophys Acta       Date:  1978-02-16

8.  The karyopherin Kap142p/Msn5p mediates nuclear import and nuclear export of different cargo proteins.

Authors:  K Yoshida; G Blobel
Journal:  J Cell Biol       Date:  2001-02-19       Impact factor: 10.539

Review 9.  AAA proteins. Lords of the ring.

Authors:  R D Vale
Journal:  J Cell Biol       Date:  2000-07-10       Impact factor: 10.539

10.  Expression and genomic analysis of midasin, a novel and highly conserved AAA protein distantly related to dynein.

Authors:  Joan E Garbarino; I R Gibbons
Journal:  BMC Genomics       Date:  2002-07-08       Impact factor: 3.969

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  189 in total

1.  Nob1p is required for cleavage of the 3' end of 18S rRNA.

Authors:  Alessandro Fatica; Marlene Oeffinger; Mensur Dlakić; David Tollervey
Journal:  Mol Cell Biol       Date:  2003-03       Impact factor: 4.272

2.  Cic1p/Nsa3p is required for synthesis and nuclear export of 60S ribosomal subunits.

Authors:  Alessandro Fatica; Marlene Oeffinger; David Tollervey; Irene Bozzoni
Journal:  RNA       Date:  2003-12       Impact factor: 4.942

3.  Sequential protein association with nascent 60S ribosomal particles.

Authors:  Cosmin Saveanu; Abdelkader Namane; Pierre-Emmanuel Gleizes; Alice Lebreton; Jean-Claude Rousselle; Jacqueline Noaillac-Depeyre; Nicole Gas; Alain Jacquier; Micheline Fromont-Racine
Journal:  Mol Cell Biol       Date:  2003-07       Impact factor: 4.272

4.  Diffusion-based transport of nascent ribosomes in the nucleus.

Authors:  Joan C Ritland Politz; Richard A Tuft; Thoru Pederson
Journal:  Mol Biol Cell       Date:  2003-09-05       Impact factor: 4.138

5.  Npa1p, a component of very early pre-60S ribosomal particles, associates with a subset of small nucleolar RNPs required for peptidyl transferase center modification.

Authors:  Christophe Dez; Carine Froment; Jacqueline Noaillac-Depeyre; Bernard Monsarrat; Michèle Caizergues-Ferrer; Yves Henry
Journal:  Mol Cell Biol       Date:  2004-07       Impact factor: 4.272

6.  The Noc proteins involved in ribosome synthesis and export contain divergent HEAT repeats.

Authors:  Mensur Dlakić; David Tollervey
Journal:  RNA       Date:  2004-03       Impact factor: 4.942

Review 7.  Many mechanisms, one entrance: membrane protein translocation into the nucleus.

Authors:  Nikolaj Zuleger; Alastair R W Kerr; Eric C Schirmer
Journal:  Cell Mol Life Sci       Date:  2012-02-12       Impact factor: 9.261

8.  Las1L is a nucleolar protein required for cell proliferation and ribosome biogenesis.

Authors:  Christopher D Castle; Erica K Cassimere; Jinho Lee; Catherine Denicourt
Journal:  Mol Cell Biol       Date:  2010-07-20       Impact factor: 4.272

9.  Tandem affinity purification combined with inducible shRNA expression as a tool to study the maturation of macromolecular assemblies.

Authors:  Emanuel Wyler; Mirjam Zimmermann; Barbara Widmann; Matthias Gstaiger; Jens Pfannstiel; Ulrike Kutay; Ivo Zemp
Journal:  RNA       Date:  2010-11-19       Impact factor: 4.942

10.  RNA polymerase I transcription and pre-rRNA processing are linked by specific SSU processome components.

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