Literature DB >> 14970380

The Noc proteins involved in ribosome synthesis and export contain divergent HEAT repeats.

Mensur Dlakić, David Tollervey.   

Abstract

The Noc1-4p proteins were previously reported to be involved in intranuclear and nucleocytoplasmic transport of pre-ribosomes. Using fold recognition and structural modeling, we show that Noc1-4p are largely comprised of alpha-helical repeats similar to HEAT repeats. Because other HEAT-repeat proteins play key roles in transport processes, this finding provides a plausible mechanistic explanation for the function of the Noc proteins.

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Year:  2004        PMID： 14970380      PMCID： PMC1370930          DOI： 10.1261/rna.5184704

Source DB:  PubMed          Journal:  RNA        ISSN： 1355-8382            Impact factor:   4.942


  29 in total

1.  PCMA: fast and accurate multiple sequence alignment based on profile consistency.

Authors:  Jimin Pei; Ruslan Sadreyev; Nick V Grishin
Journal:  Bioinformatics       Date:  2003-02-12       Impact factor: 6.937

2.  60S pre-ribosome formation viewed from assembly in the nucleolus until export to the cytoplasm.

Authors:  Tracy A Nissan; Jochen Bassler; Elisabeth Petfalski; David Tollervey; Ed Hurt
Journal:  EMBO J       Date:  2002-10-15       Impact factor: 11.598

Review 3.  Nuclear export of ribosomal subunits.

Authors:  Arlen W Johnson; Elsebet Lund; James Dahlberg
Journal:  Trends Biochem Sci       Date:  2002-11       Impact factor: 13.807

4.  Noc3p, a bHLH protein, plays an integral role in the initiation of DNA replication in budding yeast.

Authors:  Yuexuan Zhang; Zhiling Yu; Xinrong Fu; Chun Liang
Journal:  Cell       Date:  2002-06-28       Impact factor: 41.582

5.  A large nucleolar U3 ribonucleoprotein required for 18S ribosomal RNA biogenesis.

Authors:  François Dragon; Jennifer E G Gallagher; Patricia A Compagnone-Post; Brianna M Mitchell; Kara A Porwancher; Karen A Wehner; Steven Wormsley; Robert E Settlage; Jeffrey Shabanowitz; Yvonne Osheim; Ann L Beyer; Donald F Hunt; Susan J Baserga
Journal:  Nature       Date:  2002-06-09       Impact factor: 49.962

Review 6.  Pre-ribosomes on the road from the nucleolus to the cytoplasm.

Authors:  Herbert Tschochner; Ed Hurt
Journal:  Trends Cell Biol       Date:  2003-05       Impact factor: 20.808

7.  3D-Jury: a simple approach to improve protein structure predictions.

Authors:  Krzysztof Ginalski; Arne Elofsson; Daniel Fischer; Leszek Rychlewski
Journal:  Bioinformatics       Date:  2003-05-22       Impact factor: 6.937

8.  Protein folding and association: insights from the interfacial and thermodynamic properties of hydrocarbons.

Authors:  A Nicholls; K A Sharp; B Honig
Journal:  Proteins       Date:  1991

9.  A pre-ribosome-associated HEAT-repeat protein is required for export of both ribosomal subunits.

Authors:  Marlene Oeffinger; Mensur Dlakic; David Tollervey
Journal:  Genes Dev       Date:  2004-01-16       Impact factor: 11.361

10.  A Noc complex specifically involved in the formation and nuclear export of ribosomal 40 S subunits.

Authors:  Philipp Milkereit; Daniela Strauss; Jochen Bassler; Olivier Gadal; Holger Kühn; Sylvia Schütz; Nicole Gas; Johannes Lechner; Ed Hurt; Herbert Tschochner
Journal:  J Biol Chem       Date:  2002-11-20       Impact factor: 5.157
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  9 in total

1.  PIN domain of Nob1p is required for D-site cleavage in 20S pre-rRNA.

Authors:  Alessandro Fatica; David Tollervey; Mensur Dlakić
Journal:  RNA       Date:  2004-09-23       Impact factor: 4.942

2.  Human NOC3 is essential for DNA replication licensing in human cells.

Authors:  Man-Hei Cheung; Aftab Amin; Rentian Wu; Yan Qin; Lan Zou; Zhiling Yu; Chun Liang
Journal:  Cell Cycle       Date:  2019-02-17       Impact factor: 4.534

3.  Production of nascent ribosome precursors within the nucleolar microenvironment of Saccharomyces cerevisiae.

Authors:  Samantha Lin; Suchita Rajan; Sofia Lemberg; Mark Altawil; Katherine Anderson; Ruth Bryant; Sebastian Cappeta; Brandon Chin; Isabella Hamdan; Annelise Hamer; Rachel Hyzny; Andrew Karp; Daniel Lee; Alexandria Lim; Medha Nayak; Vishnu Palaniappan; Soomin Park; Sarika Satishkumar; Anika Seth; Uva Sri Dasari; Emili Toppari; Ayush Vyas; Julianne Walker; Evan Weston; Atif Zafar; Cecelia Zielke; Ganapati H Mahabeleshwar; Alan M Tartakoff
Journal:  Genetics       Date:  2022-07-04       Impact factor: 4.402

4.  Surveillance of nuclear-restricted pre-ribosomes within a subnucleolar region of Saccharomyces cerevisiae.

Authors:  Christophe Dez; Jonathan Houseley; David Tollervey
Journal:  EMBO J       Date:  2006-03-16       Impact factor: 11.598

5.  SLOW WALKER2, a NOC1/MAK21 homologue, is essential for coordinated cell cycle progression during female gametophyte development in Arabidopsis.

Authors:  Na Li; Li Yuan; Naiyou Liu; Dongqiao Shi; Xinran Li; Zuoshun Tang; Jie Liu; Venkatesan Sundaresan; Wei-Cai Yang
Journal:  Plant Physiol       Date:  2009-09-04       Impact factor: 8.340

6.  Roles of the HEAT repeat proteins Utp10 and Utp20 in 40S ribosome maturation.

Authors:  Christophe Dez; Mensur Dlakić; David Tollervey
Journal:  RNA       Date:  2007-07-24       Impact factor: 4.942

7.  Targeted disruption of Noc4l leads to preimplantation embryonic lethality in mice.

Authors:  Yongli Qin; Haifeng Li; Lina Jia; Jinghua Yan; George Fu Gao; Xiangdong Li
Journal:  Protein Cell       Date:  2017-03       Impact factor: 14.870

8.  The Noc-domain containing C-terminus of Noc4p mediates both formation of the Noc4p-Nop14p submodule and its incorporation into the SSU processome.

Authors:  Holger Kühn; Thomas Hierlmeier; Juliane Merl; Steffen Jakob; Almass-Houd Aguissa-Touré; Philipp Milkereit; Herbert Tschochner
Journal:  PLoS One       Date:  2009-12-18       Impact factor: 3.240

9.  Rrp5 binding at multiple sites coordinates pre-rRNA processing and assembly.

Authors:  Simon Lebaron; Asa Segerstolpe; Sarah L French; Tatiana Dudnakova; Flavia de Lima Alves; Sander Granneman; Juri Rappsilber; Ann L Beyer; Lars Wieslander; David Tollervey
Journal:  Mol Cell       Date:  2013-11-14       Impact factor: 17.970
  9 in total

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