Literature DB >> 12324428

Apparent subdiffusion inherent to single particle tracking.

Douglas S Martin1, Martin B Forstner, Josef A Käs.   

Abstract

Subdiffusion and its causes in both in vivo and in vitro lipid membranes have become the focus of recent research. We report apparent subdiffusion, observed via single particle tracking (SPT), in a homogeneous system that only allows normal diffusion (a DMPC monolayer in the fluid state). The apparent subdiffusion arises from slight errors in finding the actual particle position due to noise inherent in all experimental SPT systems. A model is presented that corrects this artifact, and predicts the time scales after which the effect becomes negligible. The techniques and results presented in this paper should be of use in all SPT experiments studying normal and anomalous diffusion.

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Year:  2002        PMID: 12324428      PMCID: PMC1302299          DOI: 10.1016/S0006-3495(02)73971-4

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  20 in total

1.  Properties of lipid microdomains in a muscle cell membrane visualized by single molecule microscopy.

Authors:  G J Schütz; G Kada; V P Pastushenko; H Schindler
Journal:  EMBO J       Date:  2000-03-01       Impact factor: 11.598

2.  Relationship of lipid rafts to transient confinement zones detected by single particle tracking.

Authors:  Christian Dietrich; Bing Yang; Takahiro Fujiwara; Akihiro Kusumi; Ken Jacobson
Journal:  Biophys J       Date:  2002-01       Impact factor: 4.033

3.  Single particle tracking. Analysis of diffusion and flow in two-dimensional systems.

Authors:  H Qian; M P Sheetz; E L Elson
Journal:  Biophys J       Date:  1991-10       Impact factor: 4.033

4.  Single-molecule microscopy on model membranes reveals anomalous diffusion.

Authors:  G J Schütz; H Schindler; T Schmidt
Journal:  Biophys J       Date:  1997-08       Impact factor: 4.033

5.  Nanometre-level analysis demonstrates that lipid flow does not drive membrane glycoprotein movements.

Authors:  M P Sheetz; S Turney; H Qian; E L Elson
Journal:  Nature       Date:  1989-07-27       Impact factor: 49.962

6.  Tracking kinesin-driven movements with nanometre-scale precision.

Authors:  J Gelles; B J Schnapp; M P Sheetz
Journal:  Nature       Date:  1988-02-04       Impact factor: 49.962

7.  Lateral diffusion in an archipelago. Single-particle diffusion.

Authors:  M J Saxton
Journal:  Biophys J       Date:  1993-06       Impact factor: 4.033

8.  Direct observation of brownian motion of lipids in a membrane.

Authors:  G M Lee; A Ishihara; K A Jacobson
Journal:  Proc Natl Acad Sci U S A       Date:  1991-07-15       Impact factor: 11.205

9.  Confined lateral diffusion of membrane receptors as studied by single particle tracking (nanovid microscopy). Effects of calcium-induced differentiation in cultured epithelial cells.

Authors:  A Kusumi; Y Sako; M Yamamoto
Journal:  Biophys J       Date:  1993-11       Impact factor: 4.033

10.  Tracking of cell surface receptors by fluorescence digital imaging microscopy using a charge-coupled device camera. Low-density lipoprotein and influenza virus receptor mobility at 4 degrees C.

Authors:  C M Anderson; G N Georgiou; I E Morrison; G V Stevenson; R J Cherry
Journal:  J Cell Sci       Date:  1992-02       Impact factor: 5.285

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  77 in total

1.  Localization accuracy in single-molecule microscopy.

Authors:  Raimund J Ober; Sripad Ram; E Sally Ward
Journal:  Biophys J       Date:  2004-02       Impact factor: 4.033

2.  Short class I major histocompatibility complex cytoplasmic tails differing in charge detect arbiters of lateral diffusion in the plasma membrane.

Authors:  G George Capps; Samuel Pine; Michael Edidin; Martha C Zúñiga
Journal:  Biophys J       Date:  2004-05       Impact factor: 4.033

3.  Analytical tools to distinguish the effects of localization error, confinement, and medium elasticity on the velocity autocorrelation function.

Authors:  Stephanie C Weber; Michael A Thompson; W E Moerner; Andrew J Spakowitz; Julie A Theriot
Journal:  Biophys J       Date:  2012-06-05       Impact factor: 4.033

4.  An Intermittent Model for Intracellular Motions of Gold Nanostars by k-Space Scattering Image Correlation.

Authors:  Margaux Bouzin; Laura Sironi; Giuseppe Chirico; Laura D'Alfonso; Donato Inverso; Piersandro Pallavicini; Maddalena Collini
Journal:  Biophys J       Date:  2015-12-01       Impact factor: 4.033

5.  Static and dynamic errors in particle tracking microrheology.

Authors:  Thierry Savin; Patrick S Doyle
Journal:  Biophys J       Date:  2004-11-08       Impact factor: 4.033

6.  Analysis of transient behavior in complex trajectories: application to secretory vesicle dynamics.

Authors:  Sébastien Huet; Erdem Karatekin; Viet Samuel Tran; Isabelle Fanget; Sophie Cribier; Jean-Pierre Henry
Journal:  Biophys J       Date:  2006-08-04       Impact factor: 4.033

7.  Sources of anomalous diffusion on cell membranes: a Monte Carlo study.

Authors:  Dan V Nicolau; John F Hancock; Kevin Burrage
Journal:  Biophys J       Date:  2006-12-22       Impact factor: 4.033

8.  Particle image correlation spectroscopy (PICS): retrieving nanometer-scale correlations from high-density single-molecule position data.

Authors:  S Semrau; T Schmidt
Journal:  Biophys J       Date:  2006-11-03       Impact factor: 4.033

9.  Multiple association states between glycine receptors and gephyrin identified by SPT analysis.

Authors:  Marie-Virginie Ehrensperger; Cyril Hanus; Christian Vannier; Antoine Triller; Maxime Dahan
Journal:  Biophys J       Date:  2007-02-09       Impact factor: 4.033

10.  Nanopipette delivery of individual molecules to cellular compartments for single-molecule fluorescence tracking.

Authors:  Andreas Bruckbauer; Peter James; Dejian Zhou; Ji Won Yoon; David Excell; Yuri Korchev; Roy Jones; David Klenerman
Journal:  Biophys J       Date:  2007-07-13       Impact factor: 4.033

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