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Literature DB >> 12271149

Extracting functional information from microarrays: a challenge for functional genomics.

Michael Q Zhang¹.

Abstract

Mesh：

Year: 2002 PMID： 12271149 PMCID： PMC130487 DOI： 10.1073/pnas.212532499

Source DB: PubMed Journal: Proc Natl Acad Sci U S A ISSN： 0027-8424 Impact factor: 11.205

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17 in total

1. Genome-wide location and function of DNA binding proteins.

Authors: B Ren; F Robert; J J Wyrick; O Aparicio; E G Jennings; I Simon; J Zeitlinger; J Schreiber; N Hannett; E Kanin; T L Volkert; C J Wilson; S P Bell; R A Young
Journal: Science Date: 2000-12-22 Impact factor: 47.728

2. Gene ontology: tool for the unification of biology. The Gene Ontology Consortium.

Authors: M Ashburner; C A Ball; J A Blake; D Botstein; H Butler; J M Cherry; A P Davis; K Dolinski; S S Dwight; J T Eppig; M A Harris; D P Hill; L Issel-Tarver; A Kasarskis; S Lewis; J C Matese; J E Richardson; M Ringwald; G M Rubin; G Sherlock
Journal: Nat Genet Date: 2000-05 Impact factor: 38.330

3. Genomic binding sites of the yeast cell-cycle transcription factors SBF and MBF.

Authors: V R Iyer; C E Horak; C S Scafe; D Botstein; M Snyder; P O Brown
Journal: Nature Date: 2001-01-25 Impact factor: 49.962

4. Functional discovery via a compendium of expression profiles.

Authors: T R Hughes; M J Marton; A R Jones; C J Roberts; R Stoughton; C D Armour; H A Bennett; E Coffey; H Dai; Y D He; M J Kidd; A M King; M R Meyer; D Slade; P Y Lum; S B Stepaniants; D D Shoemaker; D Gachotte; K Chakraburtty; J Simon; M Bard; S H Friend
Journal: Cell Date: 2000-07-07 Impact factor: 41.582

5. Deciphering genetic regulatory codes: a challenge for functional genomics.

Authors: Alan M Michelson
Journal: Proc Natl Acad Sci U S A Date: 2002-01-22 Impact factor: 11.205

6. Exploiting transcription factor binding site clustering to identify cis-regulatory modules involved in pattern formation in the Drosophila genome.

Authors: Benjamin P Berman; Yutaka Nibu; Barret D Pfeiffer; Pavel Tomancak; Susan E Celniker; Michael Levine; Gerald M Rubin; Michael B Eisen
Journal: Proc Natl Acad Sci U S A Date: 2002-01-22 Impact factor: 11.205

Extracting functional information from microarrays: a challenge for functional genomics.

1. Genome-wide location and function of DNA binding proteins.

2. Gene ontology: tool for the unification of biology. The Gene Ontology Consortium.

3. Genomic binding sites of the yeast cell-cycle transcription factors SBF and MBF.

4. Functional discovery via a compendium of expression profiles.

5. Deciphering genetic regulatory codes: a challenge for functional genomics.

6. Exploiting transcription factor binding site clustering to identify cis-regulatory modules involved in pattern formation in the Drosophila genome.

7. Genome-wide analysis of clustered Dorsal binding sites identifies putative target genes in the Drosophila embryo.

Review 8. Computational analysis of microarray data.

9. Molecular classification of cancer: class discovery and class prediction by gene expression monitoring.

10. Transitive functional annotation by shortest-path analysis of gene expression data.

1. Electroconvulsive seizures regulate gene expression of distinct neurotrophic signaling pathways.

2. Current awareness on comparative and functional genomics.

3. Two-Way Gene Interaction From Microarray Data Based on Correlation Methods.