Literature DB >> 12241060

Sensitivity analysis of metabolic cascades catalyzed by bifunctional enzymes.

Fernando Ortega1, Måns Ehrenberg, Luis Acerenza, Hans V Westerhoff, Francesc Mas, Marta Cascante.   

Abstract

Covalent modification/demodification cycles are common in metabolism. When the modification and demodification steps are carried out by two independent enzymes, the degree of modification can be ultrasensitive to the total concentration of either catalyst. We recently showed that the degree of modification of a target molecule cannot exhibit ultrasensitivity to the free concentrations of effectors that decide whether a bifunctional enzyme acts as modifier or demodifier. However, here we can now demonstrate that the degree of modification of a target molecule can display ultrasensitivity to the total, rather than free, concentrations of such effectors. Our results clarify some general aspects of ultrasensitive responses to effectors, including competitive inhibitors, in mono-cyclic cascades.

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Year:  2002        PMID: 12241060     DOI: 10.1023/a:1020334014497

Source DB:  PubMed          Journal:  Mol Biol Rep        ISSN: 0301-4851            Impact factor:   2.316


  8 in total

1.  Product dependence and bifunctionality compromise the ultrasensitivity of signal transduction cascades.

Authors:  Fernando Ortega; Luis Acerenza; Hans V Westerhoff; Francesc Mas; Marta Cascante
Journal:  Proc Natl Acad Sci U S A       Date:  2002-02-05       Impact factor: 11.205

2.  Fluctuations and quality of control in biological cells: zero-order ultrasensitivity reinvestigated.

Authors:  O G Berg; J Paulsson; M Ehrenberg
Journal:  Biophys J       Date:  2000-09       Impact factor: 4.033

3.  Covalent modification and metabolic control analysis. Modification to the theorems and their application to metabolic systems containing covalently modifiable enzymes.

Authors:  J R Small; D A Fell
Journal:  Eur J Biochem       Date:  1990-07-31

Review 4.  Tripping the switch fantastic: how a protein kinase cascade can convert graded inputs into switch-like outputs.

Authors:  J E Ferrell
Journal:  Trends Biochem Sci       Date:  1996-12       Impact factor: 13.807

5.  Characteristics necessary for an interconvertible enzyme cascade to generate a highly sensitive response to an effector.

Authors:  M L Cárdenas; A Cornish-Bowden
Journal:  Biochem J       Date:  1989-01-15       Impact factor: 3.857

6.  Ultrasensitivity in biochemical systems controlled by covalent modification. Interplay between zero-order and multistep effects.

Authors:  A Goldbeter; D E Koshland
Journal:  J Biol Chem       Date:  1984-12-10       Impact factor: 5.157

7.  An amplified sensitivity arising from covalent modification in biological systems.

Authors:  A Goldbeter; D E Koshland
Journal:  Proc Natl Acad Sci U S A       Date:  1981-11       Impact factor: 11.205

8.  The control of flux.

Authors:  H Kacser; J A Burns
Journal:  Symp Soc Exp Biol       Date:  1973
  8 in total
  2 in total

1.  Flux balance analysis of ammonia assimilation network in E. coli predicts preferred regulation point.

Authors:  Lu Wang; Luhua Lai; Qi Ouyang; Chao Tang
Journal:  PLoS One       Date:  2011-01-25       Impact factor: 3.240

2.  Transition to quorum sensing in an Agrobacterium population: A stochastic model.

Authors:  Andrew B Goryachev; Da-Jun Toh; Keng Boon Wee; Travis Lee; Hai-Bao Zhang; Lian-Hui Zhang
Journal:  PLoS Comput Biol       Date:  2005-09-16       Impact factor: 4.475

  2 in total

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