Literature DB >> 12228732

Interaction of adjacent primase domains within the hexameric gene 4 helicase-primase of bacteriophage T7.

Seung-Joo Lee1, Charles C Richardson.   

Abstract

The interaction of primase monomers within the hexameric gene 4 helicase-primase of bacteriophage T7 has been examined by using two genetically distinct gene 4 proteins. The T7 56-kDa gene 4 protein differs from the full-length 63-kDa protein in that it lacks the N-terminal zinc motif essential for the recognition of primase recognition sites. A second gene 4 protein, gp4-K122A, is unable to catalyze the synthesis of phosphodiester bonds as the result of an amino acid change in the catalytic site. Although each protein alone is inactive, the two together catalyze the synthesis of RNA primers. Reconstitution of activity depends on hexamer formation. We propose that the zinc motif of one subunit in the hexamer interacts with the catalytic sites of adjacent subunits.

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Year:  2002        PMID: 12228732      PMCID: PMC130524          DOI: 10.1073/pnas.202471499

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  28 in total

1.  The linker region between the helicase and primase domains of the bacteriophage T7 gene 4 protein is critical for hexamer formation.

Authors:  S Guo; S Tabor; C C Richardson
Journal:  J Biol Chem       Date:  1999-10-15       Impact factor: 5.157

2.  Crystal structure of the helicase domain from the replicative helicase-primase of bacteriophage T7.

Authors:  M R Sawaya; S Guo; S Tabor; C C Richardson; T Ellenberger
Journal:  Cell       Date:  1999-10-15       Impact factor: 41.582

3.  Crystal structure of T7 gene 4 ring helicase indicates a mechanism for sequential hydrolysis of nucleotides.

Authors:  M R Singleton; M R Sawaya; T Ellenberger; D B Wigley
Journal:  Cell       Date:  2000-06-09       Impact factor: 41.582

4.  A TOPRIM domain in the crystal structure of the catalytic core of Escherichia coli primase confirms a structural link to DNA topoisomerases.

Authors:  M Podobnik; P McInerney; M O'Donnell; J Kuriyan
Journal:  J Mol Biol       Date:  2000-07-07       Impact factor: 5.469

5.  The primase active site is on the outside of the hexameric bacteriophage T7 gene 4 helicase-primase ring.

Authors:  M S VanLoock; Y J Chen; X Yu; S S Patel; E H Egelman
Journal:  J Mol Biol       Date:  2001-08-31       Impact factor: 5.469

Review 6.  Replisome-mediated DNA replication.

Authors:  S J Benkovic; A M Valentine; F Salinas
Journal:  Annu Rev Biochem       Date:  2001       Impact factor: 23.643

Review 7.  DNA primases.

Authors:  D N Frick; C C Richardson
Journal:  Annu Rev Biochem       Date:  2001       Impact factor: 23.643

8.  Structure of the RNA polymerase domain of E. coli primase.

Authors:  J L Keck; D D Roche; A S Lynch; J M Berger
Journal:  Science       Date:  2000-03-31       Impact factor: 47.728

9.  Essential lysine residues in the RNA polymerase domain of the gene 4 primase-helicase of bacteriophage T7.

Authors:  S J Lee; C C Richardson
Journal:  J Biol Chem       Date:  2001-10-22       Impact factor: 5.157

10.  Mapping protein-protein interactions within a stable complex of DNA primase and DnaB helicase from Bacillus stearothermophilus.

Authors:  L E Bird; H Pan; P Soultanas; D B Wigley
Journal:  Biochemistry       Date:  2000-01-11       Impact factor: 3.162

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  17 in total

1.  Primer initiation and extension by T7 DNA primase.

Authors:  Udi Qimron; Seung-Joo Lee; Samir M Hamdan; Charles C Richardson
Journal:  EMBO J       Date:  2006-04-27       Impact factor: 11.598

Review 2.  Replication-fork dynamics.

Authors:  Karl E Duderstadt; Rodrigo Reyes-Lamothe; Antoine M van Oijen; David J Sherratt
Journal:  Cold Spring Harb Perspect Biol       Date:  2014-01-01       Impact factor: 10.005

3.  An in trans interaction at the interface of the helicase and primase domains of the hexameric gene 4 protein of bacteriophage T7 modulates their activities.

Authors:  Bin Zhu; Seung-Joo Lee; Charles C Richardson
Journal:  J Biol Chem       Date:  2009-07-01       Impact factor: 5.157

4.  Zinc-binding domain of the bacteriophage T7 DNA primase modulates binding to the DNA template.

Authors:  Seung-Joo Lee; Bin Zhu; Barak Akabayov; Charles C Richardson
Journal:  J Biol Chem       Date:  2012-09-28       Impact factor: 5.157

5.  Heterohexamer of 56- and 63-kDa Gene 4 Helicase-Primase of Bacteriophage T7 in DNA Replication.

Authors:  Huidong Zhang; Seung-Joo Lee; Arkadiusz W Kulczyk; Bin Zhu; Charles C Richardson
Journal:  J Biol Chem       Date:  2012-08-10       Impact factor: 5.157

6.  The roles of tryptophans in primer synthesis by the DNA primase of bacteriophage T7.

Authors:  Huidong Zhang; Seung-Joo Lee; Charles C Richardson
Journal:  J Biol Chem       Date:  2012-05-17       Impact factor: 5.157

7.  The arginine finger of bacteriophage T7 gene 4 helicase: role in energy coupling.

Authors:  Donald J Crampton; Shenyuan Guo; Donald E Johnson; Charles C Richardson
Journal:  Proc Natl Acad Sci U S A       Date:  2004-03-30       Impact factor: 11.205

8.  DNA recognition by the DNA primase of bacteriophage T7: a structure-function study of the zinc-binding domain.

Authors:  Barak Akabayov; Seung-Joo Lee; Sabine R Akabayov; Sandeep Rekhi; Bin Zhu; Charles C Richardson
Journal:  Biochemistry       Date:  2009-03-03       Impact factor: 3.162

9.  Mechanism of sequence-specific template binding by the DNA primase of bacteriophage T7.

Authors:  Seung-Joo Lee; Bin Zhu; Samir M Hamdan; Charles C Richardson
Journal:  Nucleic Acids Res       Date:  2010-03-28       Impact factor: 16.971

10.  Class-specific restrictions define primase interactions with DNA template and replicative helicase.

Authors:  Marilynn A Larson; Mark A Griep; Rafael Bressani; Kiran Chintakayala; Panos Soultanas; Steven H Hinrichs
Journal:  Nucleic Acids Res       Date:  2010-06-30       Impact factor: 16.971

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