Literature DB >> 22887996

Heterohexamer of 56- and 63-kDa Gene 4 Helicase-Primase of Bacteriophage T7 in DNA Replication.

Huidong Zhang1, Seung-Joo Lee, Arkadiusz W Kulczyk, Bin Zhu, Charles C Richardson.   

Abstract

Bacteriophage T7 expresses two forms of gene 4 protein (gp4). The 63-kDa full-length gp4 contains both the helicase and primase domains. T7 phage also express a 56-kDa truncated gp4 lacking the zinc binding domain of the primase; the protein has helicase activity but no DNA-dependent primase activity. Although T7 phage grow better when both forms are present, the role of the 56-kDa gp4 is unknown. The two molecular weight forms oligomerize by virtue of the helicase domain to form heterohexamers. The 56-kDa gp4 and any mixture of 56- and 63-kDa gp4 show higher helicase activity in DNA unwinding and strand-displacement DNA synthesis than that observed for the 63-kDa gp4. However, single-molecule measurements show that heterohexamers have helicase activity similar to the 63-kDa gp4 hexamers. In oligomerization assays the 56-kDa gp4 and any mixture of the 56- and 63-kDa gp4 oligomerize to form more hexamers than does the 63-kDa gp4. The zinc binding domain of the 63-kDa gp4 interferes with hexamer formation, an inhibition that is relieved by the insertion of the 56-kDa species. Compared with the 63-kDa gp4, heterohexamers synthesize a reduced amount of oligoribonucleotides, mediated predominately by the 63-kDa subunits via a cis mode. During coordinated DNA synthesis 7% of the tetraribonucleotides synthesized are used as primers by both heterohexamers and hexamers of the 63-kDa gp4. Overall, an equimolar mixture of the two forms of gp4 shows the highest rate of DNA synthesis during coordinated DNA synthesis.

Entities:  

Mesh:

Substances:

Year:  2012        PMID: 22887996      PMCID: PMC3464535          DOI: 10.1074/jbc.M112.401158

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  48 in total

1.  Interaction of bacteriophage T7 gene 4 primase with its template recognition site.

Authors:  D N Frick; C C Richardson
Journal:  J Biol Chem       Date:  1999-12-10       Impact factor: 5.157

2.  Single-molecule studies of the effect of template tension on T7 DNA polymerase activity.

Authors:  G J Wuite; S B Smith; M Young; D Keller; C Bustamante
Journal:  Nature       Date:  2000-03-02       Impact factor: 49.962

3.  Structure of hexameric DnaB helicase and its complex with a domain of DnaG primase.

Authors:  Scott Bailey; William K Eliason; Thomas A Steitz
Journal:  Science       Date:  2007-10-19       Impact factor: 47.728

Review 4.  Motors, switches, and contacts in the replisome.

Authors:  Samir M Hamdan; Charles C Richardson
Journal:  Annu Rev Biochem       Date:  2009       Impact factor: 23.643

5.  An in trans interaction at the interface of the helicase and primase domains of the hexameric gene 4 protein of bacteriophage T7 modulates their activities.

Authors:  Bin Zhu; Seung-Joo Lee; Charles C Richardson
Journal:  J Biol Chem       Date:  2009-07-01       Impact factor: 5.157

6.  Rescue of bacteriophage T7 DNA polymerase of low processivity by suppressor mutations affecting gene 3 endonuclease.

Authors:  Seung-Joo Lee; Kajal Chowdhury; Stanley Tabor; Charles C Richardson
Journal:  J Virol       Date:  2009-06-17       Impact factor: 5.103

7.  Communication between subunits critical to DNA binding by hexameric helicase of bacteriophage T7.

Authors:  Seung-Joo Lee; Udi Qimron; Charles C Richardson
Journal:  Proc Natl Acad Sci U S A       Date:  2008-06-23       Impact factor: 11.205

8.  Coordinating DNA replication by means of priming loop and differential synthesis rate.

Authors:  Manjula Pandey; Salman Syed; Ilker Donmez; Gayatri Patel; Taekjip Ha; Smita S Patel
Journal:  Nature       Date:  2009-11-18       Impact factor: 49.962

9.  Single-molecule studies of fork dynamics in Escherichia coli DNA replication.

Authors:  Nathan A Tanner; Samir M Hamdan; Slobodan Jergic; Karin V Loscha; Patrick M Schaeffer; Nicholas E Dixon; Antoine M van Oijen
Journal:  Nat Struct Mol Biol       Date:  2008-01-27       Impact factor: 15.369

10.  Dynamics of DNA replication loops reveal temporal control of lagging-strand synthesis.

Authors:  Samir M Hamdan; Joseph J Loparo; Masateru Takahashi; Charles C Richardson; Antoine M van Oijen
Journal:  Nature       Date:  2008-11-23       Impact factor: 49.962

View more
  4 in total

1.  Structural insight and characterization of human Twinkle helicase in mitochondrial disease.

Authors:  Amanda A Riccio; Jonathan Bouvette; Lalith Perera; Matthew J Longley; Juno M Krahn; Jason G Williams; Robert Dutcher; Mario J Borgnia; William C Copeland
Journal:  Proc Natl Acad Sci U S A       Date:  2022-08-01       Impact factor: 12.779

Review 2.  Structural Mechanisms of Hexameric Helicase Loading, Assembly, and Unwinding.

Authors:  Michael A Trakselis
Journal:  F1000Res       Date:  2016-01-27

3.  DNA Polymerase-Parental DNA Interaction Is Essential for Helicase-Polymerase Coupling during Bacteriophage T7 DNA Replication.

Authors:  Chen-Yu Lo; Yang Gao
Journal:  Int J Mol Sci       Date:  2022-01-25       Impact factor: 5.923

Review 4.  DNA Helicase-Polymerase Coupling in Bacteriophage DNA Replication.

Authors:  Chen-Yu Lo; Yang Gao
Journal:  Viruses       Date:  2021-08-31       Impact factor: 5.048

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.