Literature DB >> 12160738

Enox, a novel gene that maps 10 kb upstream of Xist and partially escapes X inactivation.

Colette M Johnston1, Alistair E T Newall, Neil Brockdorff, Tatyana B Nesterova.   

Abstract

Dosage compensation in mammals is accomplished by the transcriptional silencing of a single X chromosome in female cells, a process termed X inactivation. A cytogenetically defined region of the X chromosome, the X-inactivation center (Xic), is necessary in cis for this process. Although the precise nature of the Xic remains unknown, a key component, the Xist gene, has been shown to be essential for X inactivation. In XX somatic cells, Xist RNA is specifically transcribed from the inactive X chromosome, which is otherwise essentially heterochromatic. Previous studies aimed at defining the proximal limit of the Xic have indicated that it lies within 30 kb upstream of the Xist promoter. Here we describe a novel gene, Enox (expressed neighbor of Xist), that maps to an unmethylated CpG island 10 kb upstream of Xist. Enox transcripts are antisense relative to Xist, highly heterogeneous, and apparently noncoding. In female somatic tissue Enox partially escapes from X inactivation. We discuss the implications of these findings in relation to our understanding of the Xic.

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Year:  2002        PMID: 12160738     DOI: 10.1006/geno.2002.6819

Source DB:  PubMed          Journal:  Genomics        ISSN: 0888-7543            Impact factor:   5.736


  28 in total

Review 1.  Gracefully ageing at 50, X-chromosome inactivation becomes a paradigm for RNA and chromatin control.

Authors:  Jeannie T Lee
Journal:  Nat Rev Mol Cell Biol       Date:  2011-11-23       Impact factor: 94.444

Review 2.  The X as model for RNA's niche in epigenomic regulation.

Authors:  Jeannie T Lee
Journal:  Cold Spring Harb Perspect Biol       Date:  2010-03-31       Impact factor: 10.005

3.  Jpx RNA activates Xist by evicting CTCF.

Authors:  Sha Sun; Brian C Del Rosario; Attila Szanto; Yuya Ogawa; Yesu Jeon; Jeannie T Lee
Journal:  Cell       Date:  2013-06-20       Impact factor: 41.582

4.  Higher order chromatin structure at the X-inactivation center via looping DNA.

Authors:  Chia-Lun Tsai; Rebecca K Rowntree; Dena E Cohen; Jeannie T Lee
Journal:  Dev Biol       Date:  2008-04-18       Impact factor: 3.582

Review 5.  The X chromosome in space.

Authors:  Teddy Jégu; Eric Aeby; Jeannie T Lee
Journal:  Nat Rev Genet       Date:  2017-05-08       Impact factor: 53.242

Review 6.  Long noncoding RNAs: past, present, and future.

Authors:  Johnny T Y Kung; David Colognori; Jeannie T Lee
Journal:  Genetics       Date:  2013-03       Impact factor: 4.562

7.  Coupling of X-chromosome reactivation with the pluripotent stem cell state.

Authors:  Bernhard Payer; Jeannie T Lee
Journal:  RNA Biol       Date:  2014-08-19       Impact factor: 4.652

8.  Mapping of DNA replication origins to noncoding genes of the X-inactivation center.

Authors:  Rebecca K Rowntree; Jeannie T Lee
Journal:  Mol Cell Biol       Date:  2006-05       Impact factor: 4.272

9.  Transcriptional changes in response to X chromosome dosage in the mouse: implications for X inactivation and the molecular basis of Turner Syndrome.

Authors:  Alexandra M Lopes; Paul S Burgoyne; Andrew Ojarikre; Julien Bauer; Carole A Sargent; António Amorim; Nabeel A Affara
Journal:  BMC Genomics       Date:  2010-02-01       Impact factor: 3.969

Review 10.  Long nonoding RNAs in the X-inactivation center.

Authors:  Emily Maclary; Michael Hinten; Clair Harris; Sundeep Kalantry
Journal:  Chromosome Res       Date:  2013-12       Impact factor: 5.239

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