Literature DB >> 12160704

Three-dimensional imaging of biological complexity.

Joachim Frank1, Terence Wagenknecht, Bruce F McEwen, Michael Marko, Chyong-Ere Hsieh, Carmen A Mannella.   

Abstract

Over the past 5 years, thanks to advances in both instrumentation and computational speed, three-dimensional imaging techniques using the electron microscope have been greatly improved in two areas: electron tomography of cell organelles or cell sections and reconstruction of macromolecules from single particles. Ice embedment has brought a breakthrough in the degree of preservation of specimens under close-to-native conditions. The current challenge is to push the resolution of electron tomographic imaging to a point where macromolecular signatures can be recognized within the cellular context. We show first progress toward this goal by examples in two areas of application: the structure of the muscle triad junction and the architecture and fine structure of mitochondria. As techniques of cryo-microtomy are perfected, we hope to be able to apply tomography to high-pressure frozen sections of tissue.

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Year:  2002        PMID: 12160704     DOI: 10.1016/s1047-8477(02)00019-9

Source DB:  PubMed          Journal:  J Struct Biol        ISSN: 1047-8477            Impact factor:   2.867


  22 in total

1.  Three-dimensional organization of pKi-67: a comparative fluorescence and electron tomography study using FluoroNanogold.

Authors:  Thierry Cheutin; Marie-Françoise O'Donohue; Adrien Beorchia; Christophe Klein; Hervé Kaplan; Dominique Ploton
Journal:  J Histochem Cytochem       Date:  2003-11       Impact factor: 2.479

2.  The cell-centered database: a database for multiscale structural and protein localization data from light and electron microscopy.

Authors:  Maryann E Martone; Shenglan Zhang; Amarnath Gupta; Xufei Qian; Haiyun He; Diana L Price; Mona Wong; Simone Santini; Mark H Ellisman
Journal:  Neuroinformatics       Date:  2003

3.  Normal mode-based fitting of atomic structure into electron density maps: application to sarcoplasmic reticulum Ca-ATPase.

Authors:  Konrad Hinsen; Nathalie Reuter; Jorge Navaza; David L Stokes; Jean-Jacques Lacapère
Journal:  Biophys J       Date:  2004-11-12       Impact factor: 4.033

Review 4.  Polarisome meets spitzenkörper: microscopy, genetics, and genomics converge.

Authors:  Steven D Harris; Nick D Read; Robert W Roberson; Brian Shaw; Stephan Seiler; Mike Plamann; Michelle Momany
Journal:  Eukaryot Cell       Date:  2005-02

5.  Four-dimensional ultrafast electron microscopy.

Authors:  Vladimir A Lobastov; Ramesh Srinivasan; Ahmed H Zewail
Journal:  Proc Natl Acad Sci U S A       Date:  2005-05-09       Impact factor: 11.205

6.  Cryo-electron tomography reveals the comparative three-dimensional architecture of Prochlorococcus, a globally important marine cyanobacterium.

Authors:  Claire S Ting; Chyongere Hsieh; Sesh Sundararaman; Carmen Mannella; Michael Marko
Journal:  J Bacteriol       Date:  2007-04-20       Impact factor: 3.490

Review 7.  Advances in tomography: probing the molecular architecture of cells.

Authors:  Karen Fridman; Asaf Mader; Monika Zwerger; Natalie Elia; Ohad Medalia
Journal:  Nat Rev Mol Cell Biol       Date:  2012-10-10       Impact factor: 94.444

Review 8.  Ryanodine Receptor Structure and Function in Health and Disease.

Authors:  Gaetano Santulli; Daniel Lewis; Amedee des Georges; Andrew R Marks; Joachim Frank
Journal:  Subcell Biochem       Date:  2018

Review 9.  Single-particle reconstruction of biological macromolecules in electron microscopy--30 years.

Authors:  Joachim Frank
Journal:  Q Rev Biophys       Date:  2009-08       Impact factor: 5.318

10.  Comparison of fungal 80 S ribosomes by cryo-EM reveals diversity in structure and conformation of rRNA expansion segments.

Authors:  Jakob Nilsson; Jayati Sengupta; Richard Gursky; Poul Nissen; Joachim Frank
Journal:  J Mol Biol       Date:  2007-03-20       Impact factor: 5.469

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