Literature DB >> 12147352

A novel enzyme, 2'-hydroxybiphenyl-2-sulfinate desulfinase (DszB), from a dibenzothiophene-desulfurizing bacterium Rhodococcus erythropolis KA2-5-1: gene overexpression and enzyme characterization.

Norikazu Nakayama1, Toshiyuki Matsubara, Takashi Ohshiro, Yuko Moroto, Yasushi Kawata, Kenichi Koizumi, Yasuto Hirakawa, Masanori Suzuki, Kenji Maruhashi, Yoshikazu Izumi, Ryuichiro Kurane.   

Abstract

Dibenzothiophene (DBT), a model of organic sulfur compound in petroleum, is microbially desulfurized to 2-hydroxybiphenyl (2-HBP), and the gene operon dszABC was required for DBT desulfurization. The final step in the microbial DBT desulfurization is the conversion of 2'-hydroxybiphenyl-2-sulfinate (HBPSi) to 2-HBP catalyzed by DszB. In this study, DszB of a DBT-desulfurizing bacterium Rhodococcus erythropolis KA2-5-1 was overproduced in Escherichia coli by coexpression with chaperonin genes, groEL/groES, at 25 degrees C. The recombinant DszB was purified to homogeneity and characterized. The optimal temperature and pH for DszB activity were 35 degrees C and about 7.5, respectively. The K(m) and k(cat) values for HBPSi were 8.2 microM and 0.123.s(-1), respectively. DszB has only one cysteine residue, and the mutant enzyme completely lost the activity when the cysteine residue was changed to a serine residue. This result together with experiments using inhibitors showed that the cysteine residue contributes to the enzyme activity. DszB was also inhibited by a reaction product, 2-HBP (K(i)=0.25 mM), and its derivatives, but not by the other reaction product, sulfite. The enzyme showed a narrow substrate specificity: only 2-phenylbenzene sulfinate except HBPSi served as a substrate among the aromatic and aliphatic sulfinates or sulfonates tested. DszB was thought to be a novel enzyme (HBPSi desulfinase) in that it could specifically cleave the carbon-sulfur bond of HBPSi to give 2-HBP and sulfite ion without the aid of any other proteinic components and coenzymes.

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Year:  2002        PMID: 12147352     DOI: 10.1016/s0167-4838(02)00365-5

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  10 in total

1.  Exploring the mechanism of biocatalyst inhibition in microbial desulfurization.

Authors:  Andres Abin-Fuentes; Magdy El-Said Mohamed; Daniel I C Wang; Kristala L J Prather
Journal:  Appl Environ Microbiol       Date:  2013-10-04       Impact factor: 4.792

2.  A novel 3-sulfinopropionyl coenzyme A (3SP-CoA) desulfinase from Advenella mimigardefordensis strain DPN7T acting as a key enzyme during catabolism of 3,3'-dithiodipropionic acid is a member of the acyl-CoA dehydrogenase superfamily.

Authors:  Marc Schürmann; Anika Deters; Jan Hendrik Wübbeler; Alexander Steinbüchel
Journal:  J Bacteriol       Date:  2013-01-25       Impact factor: 3.490

3.  Paracoccus denitrificans PD1222 utilizes hypotaurine via transamination followed by spontaneous desulfination to yield acetaldehyde and, finally, acetate for growth.

Authors:  Ann-Katrin Felux; Karin Denger; Michael Weiss; Alasdair M Cook; David Schleheck
Journal:  J Bacteriol       Date:  2013-04-19       Impact factor: 3.490

4.  Crystal structures of TdsC, a dibenzothiophene monooxygenase from the thermophile Paenibacillus sp. A11-2, reveal potential for expanding its substrate selectivity.

Authors:  Tomoya Hino; Haruka Hamamoto; Hirokazu Suzuki; Hisashi Yagi; Takashi Ohshiro; Shingo Nagano
Journal:  J Biol Chem       Date:  2017-08-02       Impact factor: 5.157

5.  3-Sulfinopropionyl-coenzyme A (3SP-CoA) desulfinase from Advenella mimigardefordensis DPN7(T): crystal structure and function of a desulfinase with an acyl-CoA dehydrogenase fold.

Authors:  Marc Schürmann; Rob Meijers; Thomas R Schneider; Alexander Steinbüchel; Michele Cianci
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2015-05-23

6.  Proteomics and Metabolomics Analyses to Elucidate the Desulfurization Pathway of Chelatococcus sp.

Authors:  Naba K Bordoloi; Pabitra Bhagowati; Mihir K Chaudhuri; Ashis K Mukherjee
Journal:  PLoS One       Date:  2016-04-21       Impact factor: 3.240

7.  Construction and Characterization of a New Recombinant Vector to Remove Sulfate Repression of dsz Promoter Transcription in Biodesulfurization of Dibenzothiophene.

Authors:  Somayeh Khosravinia; Mahmood A Mahdavi; Reza Gheshlaghi; Hesam Dehghani; Behnam Rasekh
Journal:  Front Microbiol       Date:  2018-07-17       Impact factor: 5.640

8.  Desulfination by 2'-hydroxybiphenyl-2-sulfinate desulfinase proceeds via electrophilic aromatic substitution by the cysteine-27 proton.

Authors:  Inacrist Geronimo; Shawn R Nigam; Christina M Payne
Journal:  Chem Sci       Date:  2017-05-17       Impact factor: 9.825

9.  Evidence for the role of zinc on the performance of dibenzothiophene desulfurization by Gordonia alkanivorans strain 1B.

Authors:  Luís Alves; José Matos; Rogério Tenreiro; Francisco M Gírio
Journal:  J Ind Microbiol Biotechnol       Date:  2007-11-28       Impact factor: 4.258

10.  Use of folding modulators to improve heterologous protein production in Escherichia coli.

Authors:  Olga Kolaj; Stefania Spada; Sylvain Robin; J Gerard Wall
Journal:  Microb Cell Fact       Date:  2009-01-27       Impact factor: 5.328

  10 in total

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