Literature DB >> 12137538

Following evolution of bacteriorhodopsin in its reactive excited state via stimulated emission pumping.

Sanford Ruhman1, Bixue Hou, Noga Friedman, Michael Ottolenghi, Mordechai Sheves.   

Abstract

New information concerning the photochemical dynamics of bacteriorhodopsin (BR) is obtained by impulsively stimulating emission from the reactive fluorescent state. Depletion of the excited-state fluorescence leads to an equal reduction in production of later photoproducts. Accordingly, chromophores which are forced back to the ground state via emission do not continue on in the photocycle, conclusively demonstrating that the fluorescent state is a photocycle intermediate. The insensitivity of depletion dynamics to the "dump" pulse timing, throughout the fluorescent states lifetime, and the biological inactivity of the dumped population suggest that the fluorescent-state structure is constant, well-defined, and significantly different than that where crossing to the ground state takes place naturally. In conjunction with conclusions from comparing the photophysics of BR with those of synthetic analogues containing "locked" retinals, present results show that large-amplitude torsion around C13=C14 is required to go between the above structures.

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Year:  2002        PMID: 12137538     DOI: 10.1021/ja026426q

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  15 in total

1.  Contrasting the excited-state dynamics of the photoactive yellow protein chromophore: protein versus solvent environments.

Authors:  Mikas Vengris; Michael A van der Horst; Goran Zgrablic; Ivo H M van Stokkum; Stefan Haacke; Majed Chergui; Klaas J Hellingwerf; Rienk van Grondelle; Delmar S Larsen
Journal:  Biophys J       Date:  2004-09       Impact factor: 4.033

2.  Incoherent manipulation of the photoactive yellow protein photocycle with dispersed pump-dump-probe spectroscopy.

Authors:  Delmar S Larsen; Ivo H M van Stokkum; Mikas Vengris; Michael A van Der Horst; Frank L de Weerd; Klaas J Hellingwerf; Rienk van Grondelle
Journal:  Biophys J       Date:  2004-09       Impact factor: 4.033

3.  Photoisomerization and photoionization of the photoactive yellow protein chromophore in solution.

Authors:  Delmar S Larsen; Mikas Vengris; Ivo H M van Stokkum; Michael A van der Horst; Frank L de Weerd; Klaas J Hellingwerf; Rienk van Grondelle
Journal:  Biophys J       Date:  2004-04       Impact factor: 4.033

4.  Aborted double bicycle-pedal isomerization with hydrogen bond breaking is the primary event of bacteriorhodopsin proton pumping.

Authors:  Piero Altoè; Alessandro Cembran; Massimo Olivucci; Marco Garavelli
Journal:  Proc Natl Acad Sci U S A       Date:  2010-11-03       Impact factor: 11.205

5.  Uncovering the hidden ground state of green fluorescent protein.

Authors:  John T M Kennis; Delmar S Larsen; Ivo H M van Stokkum; Mikas Vengris; Jasper J van Thor; Rienk van Grondelle
Journal:  Proc Natl Acad Sci U S A       Date:  2004-12-17       Impact factor: 11.205

6.  Femtosecond stimulated Raman study of excited-state evolution in bacteriorhodopsin.

Authors:  David W McCamant; Philipp Kukura; Richard A Mathies
Journal:  J Phys Chem B       Date:  2005-05-26       Impact factor: 2.991

7.  A priori resolution of the intermediate spectra in the bacteriorhodopsin photocycle: the time evolution of the L spectrum revealed.

Authors:  László Zimányi; Jack Saltiel; Leonid S Brown; Janos K Lanyi
Journal:  J Phys Chem A       Date:  2006-02-23       Impact factor: 2.781

8.  Photochemical reaction dynamics of the primary event of vision studied by means of a hybrid molecular simulation.

Authors:  Shigehiko Hayashi; Emad Tajkhorshid; Klaus Schulten
Journal:  Biophys J       Date:  2009-01       Impact factor: 4.033

9.  Molecular dynamics simulation of bacteriorhodopsin's photoisomerization using ab initio forces for the excited chromophore.

Authors:  Shigehiko Hayashi; Emad Tajkhorshid; Klaus Schulten
Journal:  Biophys J       Date:  2003-09       Impact factor: 4.033

Review 10.  Microbial and animal rhodopsins: structures, functions, and molecular mechanisms.

Authors:  Oliver P Ernst; David T Lodowski; Marcus Elstner; Peter Hegemann; Leonid S Brown; Hideki Kandori
Journal:  Chem Rev       Date:  2013-12-23       Impact factor: 60.622

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