Literature DB >> 12128188

Hydration, slaving and protein function.

Hans Frauenfelder1, P W Fenimore, B H McMahon.   

Abstract

Protein dynamics is crucial for protein function. Proteins in living systems are not isolated, but operate in networks and in a carefully regulated environment. Understanding the external control of protein dynamics is consequently important. Hydration and solvent viscosity are among the salient properties of the environment. Dehydrated proteins and proteins in a rigid environment do not function properly. It is consequently important to understand the effect of hydration and solvent viscosity in detail. We discuss experiments that separate the two effects. These experiments have predominantly been performed with wild-type horse and sperm whale myoglobin, using the binding of carbon monoxide over a broad range of temperatures as a tool. The experiments demonstrate that data taken only in the physiological temperature range are not sufficient to understand the effect of hydration and solvent on protein relaxation and function. While the actual data come from myoglobin, it is expected that the results apply to most or all globular proteins.

Entities:  

Mesh:

Substances:

Year:  2002        PMID: 12128188     DOI: 10.1016/s0301-4622(02)00083-2

Source DB:  PubMed          Journal:  Biophys Chem        ISSN: 0301-4622            Impact factor:   2.352


  28 in total

1.  Theoretical investigation of infrared spectra and pocket dynamics of photodissociated carbonmonoxy myoglobin.

Authors:  David R Nutt; Markus Meuwly
Journal:  Biophys J       Date:  2003-12       Impact factor: 4.033

2.  Different relaxations in myoglobin after photolysis.

Authors:  Matteo Levantino; Antonio Cupane; László Zimányi; Pál Ormos
Journal:  Proc Natl Acad Sci U S A       Date:  2004-09-22       Impact factor: 11.205

3.  Coupling of protein relaxation to ligand binding and migration in myoglobin.

Authors:  Noam Agmon
Journal:  Biophys J       Date:  2004-09       Impact factor: 4.033

4.  Dynamics of biological macromolecules: not a simple slaving by hydration water.

Authors:  S Khodadadi; J H Roh; A Kisliuk; E Mamontov; M Tyagi; S A Woodson; R M Briber; A P Sokolov
Journal:  Biophys J       Date:  2010-04-07       Impact factor: 4.033

5.  Modulation of reactivity and conformation within the T-quaternary state of human hemoglobin: the combined use of mutagenesis and sol-gel encapsulation.

Authors:  Uri Samuni; Camille J Roche; David Dantsker; Laura J Juszczak; Joel M Friedman
Journal:  Biochemistry       Date:  2006-03-07       Impact factor: 3.162

Review 6.  Ligand recombination and a hierarchy of solvent slaved dynamics: the origin of kinetic phases in hemeproteins.

Authors:  Uri Samuni; David Dantsker; Camille J Roche; Joel M Friedman
Journal:  Gene       Date:  2007-05-10       Impact factor: 3.688

7.  Reaction of the Co(II)-substrate radical pair catalytic intermediate in coenzyme B12-dependent ethanolamine ammonia-lyase in frozen aqueous solution from 190 to 217 K.

Authors:  Chen Zhu; Kurt Warncke
Journal:  Biophys J       Date:  2008-09-19       Impact factor: 4.033

8.  Modulating Enzyme Activity by Altering Protein Dynamics with Solvent.

Authors:  Michael R Duff; Jose M Borreguero; Matthew J Cuneo; Arvind Ramanathan; Junhong He; Ganesh Kamath; S Chakra Chennubhotla; Flora Meilleur; Elizabeth E Howell; Kenneth W Herwig; Dean A A Myles; Pratul K Agarwal
Journal:  Biochemistry       Date:  2018-07-06       Impact factor: 3.162

9.  Osmolyte-induced perturbations of hydrogen bonding between hydration layer waters: correlation with protein conformational changes.

Authors:  Feng Guo; Joel M Friedman
Journal:  J Phys Chem B       Date:  2009-12-31       Impact factor: 2.991

10.  Charge density-dependent modifications of hydration shell waters by Hofmeister ions.

Authors:  Feng Guo; Joel M Friedman
Journal:  J Am Chem Soc       Date:  2009-08-12       Impact factor: 15.419

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.