Literature DB >> 12107121

Importance of different tfd genes for degradation of chloroaromatics by Ralstonia eutropha JMP134.

Iris Plumeier1, Danilo Pérez-Pantoja, Sabina Heim, Bernardo González, Dietmar H Pieper.   

Abstract

The tfdC(I)D(I)E(I)F(I,) and tfdD(II)C(II)E(II)F(II) gene modules of plasmid pJP4 of Ralstonia eutropha JMP134 encode complete sets of functional enzymes for the transformation of chlorocatechols into 3-oxoadipate, which are all expressed during growth on 2,4-dichlorophenoxyacetate (2,4-D). However, activity of tfd(I)-encoded enzymes was usually higher than that of tfd(II)-encoded enzymes, both in the wild-type strain grown on 2,4-D and in 3-chlorobenzoate-grown derivatives harboring only one tfd gene module. The tfdD(II)-encoded chloromuconate cycloisomerase exhibited special kinetic properties, with high activity against 3-chloromuconate and poor activity against 2-chloromuconate and unsubstituted muconate, thus explaining the different phenotypic behaviors of R. eutropha strains containing different tfd gene modules. The enzyme catalyzes the formation of an equilibrium between 2-chloromuconate and 5-chloro- and 2-chloromuconolactone and very inefficiently catalyzes dehalogenation to form trans-dienelactone as the major product, thus differing from all (chloro)muconate cycloisomerases described thus far.

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Year:  2002        PMID: 12107121      PMCID: PMC135226          DOI: 10.1128/JB.184.15.4054-4064.2002

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  48 in total

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Journal:  Nature       Date:  1970-08-15       Impact factor: 49.962

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Authors:  M Schlömann; E Schmidt; H J Knackmuss
Journal:  J Bacteriol       Date:  1990-09       Impact factor: 3.490

3.  Evidence that operons tcb, tfd, and clc encode maleylacetate reductase, the fourth enzyme of the modified ortho pathway.

Authors:  T Kasberg; D L Daubaras; A M Chakrabarty; D Kinzelt; W Reineke
Journal:  J Bacteriol       Date:  1995-07       Impact factor: 3.490

4.  Properties of six pesticide degradation plasmids isolated from Alcaligenes paradoxus and Alcaligenes eutrophus.

Authors:  R H Don; J M Pemberton
Journal:  J Bacteriol       Date:  1981-02       Impact factor: 3.490

5.  Sequence analysis of the Pseudomonas sp. strain P51 tcb gene cluster, which encodes metabolism of chlorinated catechols: evidence for specialization of catechol 1,2-dioxygenases for chlorinated substrates.

Authors:  J R van der Meer; R I Eggen; A J Zehnder; W M de Vos
Journal:  J Bacteriol       Date:  1991-04       Impact factor: 3.490

6.  The tfdR gene product can successfully take over the role of the insertion element-inactivated TfdT protein as a transcriptional activator of the tfdCDEF gene cluster, which encodes chlorocatechol degradation in Ralstonia eutropha JMP134(pJP4)

Authors:  J H Leveau; J R van der Meer
Journal:  J Bacteriol       Date:  1996-12       Impact factor: 3.490

7.  Chromosomal integration, tandem amplification, and deamplification in Pseudomonas putida F1 of a 105-kilobase genetic element containing the chlorocatechol degradative genes from Pseudomonas sp. Strain B13.

Authors:  R Ravatn; S Studer; D Springael; A J Zehnder; J R van der Meer
Journal:  J Bacteriol       Date:  1998-09       Impact factor: 3.490

8.  Identification of the Inducing Agent of the 2,4-Dichlorophenoxyacetic Acid Pathway Encoded by Plasmid pJP4.

Authors:  K Filer; A R Harker
Journal:  Appl Environ Microbiol       Date:  1997-01       Impact factor: 4.792

9.  Recombination of a 3-chlorobenzoate catabolic plasmid from Alcaligenes eutrophus NH9 mediated by direct repeat elements.

Authors:  N Ogawa; K Miyashita
Journal:  Appl Environ Microbiol       Date:  1995-11       Impact factor: 4.792

10.  Analysis of duplicated gene sequences associated with tfdR and tfdS in Alcaligenes eutrophus JMP134.

Authors:  U Matrubutham; A R Harker
Journal:  J Bacteriol       Date:  1994-04       Impact factor: 3.490

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  16 in total

1.  Two chlorocatechol catabolic gene modules on plasmid pJP4.

Authors:  Michael Schlömann
Journal:  J Bacteriol       Date:  2002-08       Impact factor: 3.490

2.  Chloromethylmuconolactones as critical metabolites in the degradation of chloromethylcatechols: recalcitrance of 2-chlorotoluene.

Authors:  Katrin Pollmann; Victor Wray; Dietmar H Pieper
Journal:  J Bacteriol       Date:  2005-04       Impact factor: 3.490

3.  Molecular and population analyses of a recombination event in the catabolic plasmid pJP4.

Authors:  Juanita Larraín-Linton; Rodrigo De la Iglesia; Francisco Melo; Bernardo González
Journal:  J Bacteriol       Date:  2006-10       Impact factor: 3.490

4.  Effect of glucose on the fatty acid composition of Cupriavidus necator JMP134 during 2,4-dichlorophenoxyacetic acid degradation: implications for lipid-based stable isotope probing methods.

Authors:  Thomas Z Lerch; Marie-France Dignac; Enrique Barriuso; André Mariotti
Journal:  Appl Environ Microbiol       Date:  2011-08-19       Impact factor: 4.792

5.  Chlorophenol hydroxylases encoded by plasmid pJP4 differentially contribute to chlorophenoxyacetic acid degradation.

Authors:  T Ledger; D H Pieper; B González
Journal:  Appl Environ Microbiol       Date:  2006-04       Impact factor: 4.792

6.  The completely sequenced plasmid pEST4011 contains a novel IncP1 backbone and a catabolic transposon harboring tfd genes for 2,4-dichlorophenoxyacetic acid degradation.

Authors:  Eve Vedler; Merle Vahter; Ain Heinaru
Journal:  J Bacteriol       Date:  2004-11       Impact factor: 3.490

7.  Efficient degradation of 2,4,6-Trichlorophenol requires a set of catabolic genes related to tcp genes from Ralstonia eutropha JMP134(pJP4).

Authors:  V Matus; M A Sánchez; M Martínez; B González
Journal:  Appl Environ Microbiol       Date:  2003-12       Impact factor: 4.792

8.  The complete multipartite genome sequence of Cupriavidus necator JMP134, a versatile pollutant degrader.

Authors:  Athanasios Lykidis; Danilo Pérez-Pantoja; Thomas Ledger; Kostantinos Mavromatis; Iain J Anderson; Natalia N Ivanova; Sean D Hooper; Alla Lapidus; Susan Lucas; Bernardo González; Nikos C Kyrpides
Journal:  PLoS One       Date:  2010-03-22       Impact factor: 3.240

9.  Genetic analysis of phenoxyalkanoic acid degradation in Sphingomonas herbicidovorans MH.

Authors:  Tina A Müller; Steven M Byrde; Christoph Werlen; Jan Roelof van der Meer; Hans-Peter E Kohler
Journal:  Appl Environ Microbiol       Date:  2004-10       Impact factor: 4.792

10.  Formation of protoanemonin from 2-chloro-cis,cis-muconate by the combined action of muconate cycloisomerase and muconolactone isomerase.

Authors:  Anke Skiba; Volker Hecht; Dietmar Helmut Pieper
Journal:  J Bacteriol       Date:  2002-10       Impact factor: 3.490

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