Literature DB >> 12081454

Intraresidue HNCA and COHNCA experiments for protein backbone resonance assignment.

Bernhard Brutscher1.   

Abstract

Two novel experiments, intra-HNCA and intra-COHNCA, are presented for sequential backbone resonance assignment of (13)C, (15)N labeled proteins. The advantage with respect to conventional pulse schemes is the suppression of the sequential (15)N-->(13)C(alpha) coherence transfer pathway, which can be separately obtained from a HNCOCA correlation experiment. This results in a two-fold reduction of the number of detected correlation peaks. Spectral simplification is especially important for efficient automated assignment protocols as required in the context of high-throughput protein studies by NMR. The performance of the new experiments is demonstrated on an 18-kDa protein fragment of the E. coli sulfite reductase and compared to conventional techniques in terms of sensitivity and resolution.

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Year:  2002        PMID: 12081454     DOI: 10.1006/jmre.2002.2546

Source DB:  PubMed          Journal:  J Magn Reson        ISSN: 1090-7807            Impact factor:   2.229


  20 in total

1.  Non-uniformly sampled double-TROSY hNcaNH experiments for NMR sequential assignments of large proteins.

Authors:  Dominique P Frueh; Zhen-Yu J Sun; David A Vosburg; Christopher T Walsh; Jeffrey C Hoch; Gerhard Wagner
Journal:  J Am Chem Soc       Date:  2006-05-03       Impact factor: 15.419

2.  GFT NMR experiments for polypeptide backbone and 13Cbeta chemical shift assignment.

Authors:  Seho Kim; Thomas Szyperski
Journal:  J Biomol NMR       Date:  2004-02       Impact factor: 2.835

3.  A selective intra-HN(CA)CO experiment for the backbone assignment of deuterated proteins.

Authors:  Daniel Nietlispach
Journal:  J Biomol NMR       Date:  2004-02       Impact factor: 2.835

4.  Combined frequency- and time-domain NMR spectroscopy. Application to fast protein resonance assignment.

Authors:  Bernhard Brutscher
Journal:  J Biomol NMR       Date:  2004-05       Impact factor: 2.835

5.  HA-detected experiments for the backbone assignment of intrinsically disordered proteins.

Authors:  Sampo Mäntylahti; Olli Aitio; Maarit Hellman; Perttu Permi
Journal:  J Biomol NMR       Date:  2010-05-01       Impact factor: 2.835

6.  Automated resonance assignment of proteins: 6D APSY-NMR.

Authors:  Francesco Fiorito; Sebastian Hiller; Gerhard Wider; Kurt Wüthrich
Journal:  J Biomol NMR       Date:  2006-05-31       Impact factor: 2.835

7.  4D non-uniformly sampled HCBCACON and ¹J(NCα)-selective HCBCANCO experiments for the sequential assignment and chemical shift analysis of intrinsically disordered proteins.

Authors:  Jiří Nováček; Noam Y Haba; Jordan H Chill; Lukáš Zídek; Vladimír Sklenář
Journal:  J Biomol NMR       Date:  2012-05-13       Impact factor: 2.835

8.  Bridge over troubled proline: assignment of intrinsically disordered proteins using (HCA)CON(CAN)H and (HCA)N(CA)CO(N)H experiments concomitantly with HNCO and i(HCA)CO(CA)NH.

Authors:  Maarit Hellman; Henni Piirainen; Veli-Pekka Jaakola; Perttu Permi
Journal:  J Biomol NMR       Date:  2013-12-18       Impact factor: 2.835

9.  High-Resolution Diffusion Measurements of Proteins by NMR under Near-Physiological Conditions.

Authors:  Jongchan Lee; Sho Hee Park; Silvia Cavagnero; Jung Ho Lee
Journal:  Anal Chem       Date:  2020-03-20       Impact factor: 6.986

10.  Improved accuracy in measuring one-bond and two-bond (15)N, (13)C (α) coupling constants in proteins by double-inphase/antiphase (DIPAP) spectroscopy.

Authors:  Frank Löhr; Sina Reckel; Susanne Stefer; Volker Dötsch; Jürgen M Schmidt
Journal:  J Biomol NMR       Date:  2011-06-07       Impact factor: 2.835

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