Literature DB >> 12080102

Stochastic properties of Ca(2+) release of inositol 1,4,5-trisphosphate receptor clusters.

Jian-Wei Shuai1, Peter Jung.   

Abstract

Intracellular Ca(2+) release is controlled by inositol 1,4,5-trisphosphate (IP(3)) receptors or ryanodine receptors. These receptors are typically distributed in clusters with several or tens of channels. The random opening and closing of these channels introduces stochasticity into the elementary calcium release mechanism. Stochastic release events have been experimentally observed in a variety of cell types and have been termed sparks and puffs. We put forward a stochastic version of the Li-Rinzel model (the deactivation binding process is described by a Markovian scheme) and a computationally more efficient Langevin approach to model the stochastic Ca(2+) oscillation of single clusters. Statistical properties such as Ca(2+) puff amplitudes, lifetimes, and interpuff intervals are studied with both models and compared with experimental observations. For clusters with tens of channels, a simply decaying amplitude distribution is typically observed at low IP(3) concentration, while a single peak distribution appears at high IP(3) concentration.

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Year:  2002        PMID: 12080102      PMCID: PMC1302129          DOI: 10.1016/S0006-3495(02)75151-5

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  41 in total

1.  From calcium blips to calcium puffs: theoretical analysis of the requirements for interchannel communication.

Authors:  S Swillens; G Dupont; L Combettes; P Champeil
Journal:  Proc Natl Acad Sci U S A       Date:  1999-11-23       Impact factor: 11.205

2.  Stochastic spreading of intracellular Ca(2+) release.

Authors:  M Falcke; L Tsimring; H Levine
Journal:  Phys Rev E Stat Phys Plasmas Fluids Relat Interdiscip Topics       Date:  2000-08

3.  Discrete stochastic modeling of calcium channel dynamics.

Authors:  M Bär; M Falcke; H Levine; L S Tsimring
Journal:  Phys Rev Lett       Date:  2000-06-12       Impact factor: 9.161

4.  Sparks and puffs in oligodendrocyte progenitors: cross talk between ryanodine receptors and inositol trisphosphate receptors.

Authors:  L L Haak; L S Song; T F Molinski; I N Pessah; H Cheng; J T Russell
Journal:  J Neurosci       Date:  2001-06-01       Impact factor: 6.167

5.  Sensitivity of CaM kinase II to the frequency of Ca2+ oscillations.

Authors:  P De Koninck; H Schulman
Journal:  Science       Date:  1998-01-09       Impact factor: 47.728

6.  Activation and co-ordination of InsP3-mediated elementary Ca2+ events during global Ca2+ signals in Xenopus oocytes.

Authors:  N Callamaras; J S Marchant; X P Sun; I Parker
Journal:  J Physiol       Date:  1998-05-15       Impact factor: 5.182

7.  Imaging the hierarchical Ca2+ signalling system in HeLa cells.

Authors:  M Bootman; E Niggli; M Berridge; P Lipp
Journal:  J Physiol       Date:  1997-03-01       Impact factor: 5.182

8.  Stochastic versions of the Hodgkin-Huxley equations.

Authors:  R F Fox
Journal:  Biophys J       Date:  1997-05       Impact factor: 4.033

9.  Equations for InsP3 receptor-mediated [Ca2+]i oscillations derived from a detailed kinetic model: a Hodgkin-Huxley like formalism.

Authors:  Y X Li; J Rinzel
Journal:  J Theor Biol       Date:  1994-02-21       Impact factor: 2.691

10.  Role of elementary Ca(2+) puffs in generating repetitive Ca(2+) oscillations.

Authors:  J S Marchant; I Parker
Journal:  EMBO J       Date:  2001-01-15       Impact factor: 11.598

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  40 in total

1.  Optimal ion channel clustering for intracellular calcium signaling.

Authors:  J W Shuai; P Jung
Journal:  Proc Natl Acad Sci U S A       Date:  2003-01-07       Impact factor: 11.205

2.  Buffer kinetics shape the spatiotemporal patterns of IP3-evoked Ca2+ signals.

Authors:  Sheila L Dargan; Ian Parker
Journal:  J Physiol       Date:  2003-10-10       Impact factor: 5.182

3.  A mathematical model for astrocytes mediated LTP at single hippocampal synapses.

Authors:  Shivendra Tewari; Kaushik Majumdar
Journal:  J Comput Neurosci       Date:  2012-03-28       Impact factor: 1.621

4.  Spatiotemporal organization of Ca dynamics: a modeling-based approach.

Authors:  Geneviève Dupont; Huguette Croisier
Journal:  HFSP J       Date:  2010-04-21

5.  Transition from stochastic to deterministic behavior in calcium oscillations.

Authors:  Ursula Kummer; Borut Krajnc; Jürgen Pahle; Anne K Green; C Jane Dixon; Marko Marhl
Journal:  Biophys J       Date:  2005-07-01       Impact factor: 4.033

6.  Reaction diffusion modeling of calcium dynamics with realistic ER geometry.

Authors:  Shawn Means; Alexander J Smith; Jason Shepherd; John Shadid; John Fowler; Richard J H Wojcikiewicz; Tomas Mazel; Gregory D Smith; Bridget S Wilson
Journal:  Biophys J       Date:  2006-04-14       Impact factor: 4.033

7.  The number and spatial distribution of IP3 receptors underlying calcium puffs in Xenopus oocytes.

Authors:  Jianwei Shuai; Heather J Rose; Ian Parker
Journal:  Biophys J       Date:  2006-09-15       Impact factor: 4.033

8.  Internal noise-sustained circadian rhythms in a Drosophila model.

Authors:  Qianshu Li; Xiufeng Lang
Journal:  Biophys J       Date:  2007-11-09       Impact factor: 4.033

9.  How does intracellular Ca2+ oscillate: by chance or by the clock?

Authors:  Alexander Skupin; Helmut Kettenmann; Ulrike Winkler; Maria Wartenberg; Heinrich Sauer; Stephen C Tovey; Colin W Taylor; Martin Falcke
Journal:  Biophys J       Date:  2007-12-07       Impact factor: 4.033

10.  A kinetic model of single and clustered IP3 receptors in the absence of Ca2+ feedback.

Authors:  Jianwei Shuai; John E Pearson; J Kevin Foskett; Don-On Daniel Mak; Ian Parker
Journal:  Biophys J       Date:  2007-05-25       Impact factor: 4.033

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