Literature DB >> 10991020

Discrete stochastic modeling of calcium channel dynamics.

M Bär1, M Falcke, H Levine, L S Tsimring.   

Abstract

We propose a discrete stochastic model for calcium dynamics in living cells. A set of probabilities for the opening/closing of calcium channels is assumed to depend on the calcium concentration. We study this model in one dimension, analytically in the limit of a large number of channels per site N, and numerically for small N. As the number of channels per site is increased, the transition from a nonpropagating region of activity to a propagating one changes from one described by directed percolation to that of deterministic depinning in a spatially discrete system. Also, for a small number of channels a propagating calcium wave can leave behind a novel fluctuation-driven state.

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Year:  2000        PMID: 10991020     DOI: 10.1103/PhysRevLett.84.5664

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  9 in total

1.  Stochastic properties of Ca(2+) release of inositol 1,4,5-trisphosphate receptor clusters.

Authors:  Jian-Wei Shuai; Peter Jung
Journal:  Biophys J       Date:  2002-07       Impact factor: 4.033

2.  Wave bifurcation and propagation failure in a model of Ca(2+) release.

Authors:  Y Timofeeva; S Coombes
Journal:  J Math Biol       Date:  2003-05-15       Impact factor: 2.259

3.  Release currents of IP(3) receptor channel clusters and concentration profiles.

Authors:  R Thul; M Falcke
Journal:  Biophys J       Date:  2004-05       Impact factor: 4.033

4.  Hybrid stochastic and deterministic simulations of calcium blips.

Authors:  S Rüdiger; J W Shuai; W Huisinga; C Nagaiah; G Warnecke; I Parker; M Falcke
Journal:  Biophys J       Date:  2007-05-11       Impact factor: 4.033

5.  Calcium waves in a grid of clustered channels with synchronous IP3 binding and unbinding.

Authors:  M Rückl; S Rüdiger
Journal:  Eur Phys J E Soft Matter       Date:  2016-11-17       Impact factor: 1.890

6.  Intra-cluster percolation of calcium signals.

Authors:  Guillermo Solovey; Silvina Ponce Dawson
Journal:  PLoS One       Date:  2010-02-18       Impact factor: 3.240

7.  Buffers and oscillations in intracellular Ca2+ dynamics.

Authors:  Martin Falcke
Journal:  Biophys J       Date:  2003-01       Impact factor: 4.033

8.  Abortive and propagating intracellular calcium waves: analysis from a hybrid model.

Authors:  Nara Guisoni; Paola Ferrero; Carla Layana; Luis Diambra
Journal:  PLoS One       Date:  2015-01-20       Impact factor: 3.240

9.  Role of time delay on intracellular calcium dynamics driven by non-Gaussian noises.

Authors:  Wei-Long Duan; Chunhua Zeng
Journal:  Sci Rep       Date:  2016-04-28       Impact factor: 4.379

  9 in total

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