Literature DB >> 12077427

Generating isomorphous heavy-atom derivatives by a quick-soak method. Part I: test cases.

Peter D Sun1, Sergei Radaev, Michael Kattah.   

Abstract

Screening for heavy-atom derivatives remains a time-consuming and cumbersome process that often results in non-isomorphous derivatives whose phases cannot be combined. Using lysozyme and FcgammaRIII receptor crystals as test cases, an improved soaking method for the generation of conventional heavy-atom derivatives has been developed. The method is based on soaking crystals in heavy-atom compounds for a very brief time at near-saturation concentrations. Compared with the current heavy-atom soaking method, which often takes days to achieve a derivatization, the quick-soak method completes a derivatization within 10 min to 2 h. The bound heavy-atom sites display higher peak heights from quick soaks than from overnight soaks in all cases tested. The quick-soak derivatives also preserved native-like diffraction resolution and data quality that was better than the prolonged-soak derivatives. Furthermore, derivatives generated by brief soaks are more isomorphous to the native than those generated by overnight soaks. Short soaks not only increase the likelihood of success in heavy-atom screening by reducing the pitfalls associated with prolonged soaks, such as lack of isomorphism and overall lattice disorder, but also have the potential to transform a time-consuming derivative screening into an 'on-the-fly' real-time derivatization process.

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Year:  2002        PMID: 12077427     DOI: 10.1107/s0907444902006510

Source DB:  PubMed          Journal:  Acta Crystallogr D Biol Crystallogr        ISSN: 0907-4449


  16 in total

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6.  A rapid and rational approach to generating isomorphous heavy-atom phasing derivatives.

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9.  A rational approach to heavy-atom derivative screening.

Authors:  M Gordon Joyce; Sergei Radaev; Peter D Sun
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-03-24

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