Literature DB >> 12059249

The reaction of triplet flavin with indole. A study of the cascade of reactive intermediates using density functional theory and time resolved infrared spectroscopy.

Christopher B Martin1, Meng-Lin Tsao, Christopher M Hadad, Matthew S Platz.   

Abstract

As a model for riboflavin, lumiflavin was investigated using density functional theory methods (B3LYP/6-31G* and B3LYP/6-31+G**) with regard to the proposed cascade of intermediates formed after excitation to the triplet state, followed by electron-transfer, proton-transfer, and radical[bond]radical coupling reactions. The excited triplet state of the flavin is predicted to be 42 kcal/mol higher in energy than the singlet ground state, and the pi radical anion lies 45.1 kcal/mol lower in energy than the ground-state flavin and a free electron in the gas phase. The former value compares to a solution-phase triplet energy of 49.8 kcal/mol of riboflavin. For the radical anion, the thermodynamically favored position to accept a proton on the flavin ring system is at N(5). A natural population analysis also provided spin density information for the radicals and insight into the origin of the relative stabilities of the six different calculated hydroflavin radicals. The resulting 5H-LF* radical can then undergo radical[bond]radical coupling reactions, with the most thermodynamically stable adduct being formed at C(4'). Vibrational spectra were also calculated for the transient species. Experimental time-resolved infrared spectroscopic data obtained using riboflavin tetraacetate are in excellent agreement with the calculated spectra for the triplet flavin, the radical anion, and the most stable hydroflavin radical.

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Year:  2002        PMID: 12059249     DOI: 10.1021/ja0123711

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  7 in total

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Authors:  Ewa Sikorska; Igor V Khmelinskii; David R Worrall; Jacek Koput; Marek Sikorski
Journal:  J Fluoresc       Date:  2004-01       Impact factor: 2.217

2.  Time-resolved Fourier transform infrared study on photoadduct formation and secondary structural changes within the phototropin LOV domain.

Authors:  Anna Pfeifer; Teresa Majerus; Kazunori Zikihara; Daisuke Matsuoka; Satoru Tokutomi; Joachim Heberle; Tilman Kottke
Journal:  Biophys J       Date:  2009-02-18       Impact factor: 4.033

3.  Primary reactions of the LOV2 domain of phototropin studied with ultrafast mid-infrared spectroscopy and quantum chemistry.

Authors:  Maxime T A Alexandre; Tatiana Domratcheva; Cosimo Bonetti; Luuk J G W van Wilderen; Rienk van Grondelle; Marie-Louise Groot; Klaas J Hellingwerf; John T M Kennis
Journal:  Biophys J       Date:  2009-07-08       Impact factor: 4.033

4.  Time-resolved infrared spectroscopy of the lowest triplet state of thymine and thymidine.

Authors:  Patrick M Hare; Chris T Middleton; Kristin I Mertel; John M Herbert; Bern Kohler
Journal:  Chem Phys       Date:  2008-05-23       Impact factor: 2.348

5.  Hydrogen bond switching among flavin and amino acid side chains in the BLUF photoreceptor observed by ultrafast infrared spectroscopy.

Authors:  Cosimo Bonetti; Tilo Mathes; Ivo H M van Stokkum; Katharine M Mullen; Marie-Louise Groot; Rienk van Grondelle; Peter Hegemann; John T M Kennis
Journal:  Biophys J       Date:  2008-08-15       Impact factor: 4.033

6.  Spectroscopy and Photophysics of Monomethyl-Substituted Derivatives of 5-Deazaalloxazine and 10-Ethyl-5-Deaza-Isoalloxazine.

Authors:  Dorota Prukała; Magdalena Taczkowska; Mateusz Gierszewski; Tomasz Pędziński; Marek Sikorski
Journal:  J Fluoresc       Date:  2013-11-23       Impact factor: 2.217

7.  Blue and Long-Wave Ultraviolet Light Induce in vitro Neutrophil Extracellular Trap (NET) Formation.

Authors:  Elsa Neubert; Katharina Marie Bach; Julia Busse; Ivan Bogeski; Michael P Schön; Sebastian Kruss; Luise Erpenbeck
Journal:  Front Immunol       Date:  2019-10-25       Impact factor: 7.561

  7 in total

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