Literature DB >> 12057197

X-ray crystallographic studies on butyryl-ACP reveal flexibility of the structure around a putative acyl chain binding site.

Anna Roujeinikova1, Clair Baldock, William J Simon, John Gilroy, Patrick J Baker, Antoine R Stuitje, David W Rice, Antoni R Slabas, John B Rafferty.   

Abstract

Acyl carrier protein (ACP) is an essential cofactor in biosynthesis of fatty acids and many other reactions that require acyl transfer steps. We have determined the first crystal structures of an acylated form of ACP from E. coli, that of butyryl-ACP. Our analysis of the molecular surface of ACP reveals a plastic hydrophobic cavity in the vicinity of the phosphopantethylated Ser36 residue that is expanded and occupied by the butyryl and beta-mercaptoethylamine moieties of the acylated 4'-phosphopantetheine group in one of our crystal forms. In the other form, the cavity is contracted, and we propose that the protein has adopted the conformation after delivery of substrate into the active site of a partner enzyme.

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Year:  2002        PMID: 12057197     DOI: 10.1016/s0969-2126(02)00775-x

Source DB:  PubMed          Journal:  Structure        ISSN: 0969-2126            Impact factor:   5.006


  42 in total

1.  Acyl carrier protein structural classification and normal mode analysis.

Authors:  David C Cantu; Michael J Forrester; Katherine Charov; Peter J Reilly
Journal:  Protein Sci       Date:  2012-03-29       Impact factor: 6.725

2.  Electrospray ionization mass spectra of acyl carrier protein are insensitive to its solution phase conformation.

Authors:  Peter W Murphy; Elden E Rowland; David M Byers
Journal:  J Am Soc Mass Spectrom       Date:  2007-05-24       Impact factor: 3.109

3.  Insights into Thiotemplated Pyrrole Biosynthesis Gained from the Crystal Structure of Flavin-Dependent Oxidase in Complex with Carrier Protein.

Authors:  Hem R Thapa; John M Robbins; Bradley S Moore; Vinayak Agarwal
Journal:  Biochemistry       Date:  2019-01-23       Impact factor: 3.162

4.  Molecular dynamics simulations of the Apo-, Holo-, and acyl-forms of Escherichia coli acyl carrier protein.

Authors:  David I Chan; Thomas Stockner; D Peter Tieleman; Hans J Vogel
Journal:  J Biol Chem       Date:  2008-09-22       Impact factor: 5.157

5.  Binding and "pKa" modulation of a polycyclic substrate analogue in a type II polyketide acyl carrier protein.

Authors:  Robert W Haushalter; Fabian V Filipp; Kwang-Seuk Ko; Ricky Yu; Stanley J Opella; Michael D Burkart
Journal:  ACS Chem Biol       Date:  2011-02-22       Impact factor: 5.100

6.  Structure of acyl carrier protein bound to FabI, the FASII enoyl reductase from Escherichia coli.

Authors:  Salma Rafi; Polina Novichenok; Subramaniapillai Kolappan; Christopher F Stratton; Richa Rawat; Caroline Kisker; Carlos Simmerling; Peter J Tonge
Journal:  J Biol Chem       Date:  2006-09-29       Impact factor: 5.157

7.  Structural modification of acyl carrier protein by butyryl group.

Authors:  Bai-Nan Wu; Yong-Mei Zhang; Charles O Rock; Jie J Zheng
Journal:  Protein Sci       Date:  2009-01       Impact factor: 6.725

8.  Intein-mediated cyclization of bacterial acyl carrier protein stabilizes its folded conformation but does not abolish function.

Authors:  Gerrit Volkmann; Peter W Murphy; Elden E Rowland; John E Cronan; Xiang-Qin Liu; Christian Blouin; David M Byers
Journal:  J Biol Chem       Date:  2010-01-18       Impact factor: 5.157

Review 9.  Structural analysis of protein-protein interactions in type I polyketide synthases.

Authors:  Wei Xu; Kangjian Qiao; Yi Tang
Journal:  Crit Rev Biochem Mol Biol       Date:  2012-12-19       Impact factor: 8.250

10.  The length of the bound fatty acid influences the dynamics of the acyl carrier protein and the stability of the thioester bond.

Authors:  Gregory A Zornetzer; Justinn Tanem; Brian G Fox; John L Markley
Journal:  Biochemistry       Date:  2010-01-26       Impact factor: 3.162

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