Literature DB >> 12003493

Replacement of the yeast TRP4 3' untranslated region by a hammerhead ribozyme results in a stable and efficiently exported mRNA that lacks a poly(A) tail.

Katrin Düvel1, Oliver Valerius, David A Mangus, Allan Jacobson, Gerhard H Braus.   

Abstract

The mRNA poly(A) tail serves different purposes, including the facilitation of nuclear export, mRNA stabilization, efficient translation, and, finally, specific degradation. The posttranscriptional addition of a poly(A) tail depends on sequence motifs in the 3' untranslated region (3' UTR) of the mRNA and a complex trans-acting protein machinery. In this study, we have replaced the 3' UTR of the yeast TRP4 gene with sequences encoding a hammerhead ribozyme that efficiently cleaves itself in vivo. Expression of the TRP4-ribozyme allele resulted in the accumulation of a nonpolyadenylated mRNA. Cells expressing the TRP4-ribozyme mRNA showed a reduced growth rate due to a reduction in Trp4p enzyme activity. The reduction in enzyme activity was not caused by inefficient mRNA export from the nucleus or mRNA destabilization. Rather, analyses of mRNA association with polyribosomes indicate that translation of the ribozyme-containing mRNA is impaired. This translational defect allows sufficient synthesis of Trp4p to support growth of trp4 cells, but is, nevertheless, of such magnitude as to activate the general control network of amino acid biosynthesis.

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Year:  2002        PMID: 12003493      PMCID: PMC1370255          DOI: 10.1017/s1355838202021039

Source DB:  PubMed          Journal:  RNA        ISSN: 1355-8382            Impact factor:   4.942


  46 in total

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Authors:  D Munroe; A Jacobson
Journal:  Mol Cell Biol       Date:  1990-07       Impact factor: 4.272

2.  Translation and a 42-nucleotide segment within the coding region of the mRNA encoded by the MAT alpha 1 gene are involved in promoting rapid mRNA decay in yeast.

Authors:  R Parker; A Jacobson
Journal:  Proc Natl Acad Sci U S A       Date:  1990-04       Impact factor: 11.205

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Authors:  T R Cech
Journal:  Annu Rev Biochem       Date:  1990       Impact factor: 23.643

4.  The TRP4 gene of Saccharomyces cerevisiae: isolation and structural analysis.

Authors:  R Furter; G Paravicini; M Aebi; G Braus; F Prantl; P Niederberger; R Hütter
Journal:  Nucleic Acids Res       Date:  1986-08-26       Impact factor: 16.971

5.  Rapid production of full-length cDNAs from rare transcripts: amplification using a single gene-specific oligonucleotide primer.

Authors:  M A Frohman; M K Dush; G R Martin
Journal:  Proc Natl Acad Sci U S A       Date:  1988-12       Impact factor: 11.205

6.  Regulation of the TRP4 gene of Saccharomyces cerevisiae at the transcriptional level and functional analysis of its promotor.

Authors:  R Furter; G Braus; G Paravicini; H U Mösch; P Niederberger; R Hütter
Journal:  Mol Gen Genet       Date:  1988-01

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Authors:  G F Miozzari; P Niederberger; R Hütter
Journal:  Anal Biochem       Date:  1978-10-01       Impact factor: 3.365

8.  Nuclear tRNA aminoacylation and its role in nuclear export of endogenous tRNAs in Saccharomyces cerevisiae.

Authors:  S Sarkar; A K Azad; A K Hopper
Journal:  Proc Natl Acad Sci U S A       Date:  1999-12-07       Impact factor: 11.205

9.  Quality control of mRNA 3'-end processing is linked to the nuclear exosome.

Authors:  P Hilleren; T McCarthy; M Rosbash; R Parker; T H Jensen
Journal:  Nature       Date:  2001-10-04       Impact factor: 49.962

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Authors:  R S Sikorski; P Hieter
Journal:  Genetics       Date:  1989-05       Impact factor: 4.562

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  13 in total

1.  Polyadenylation of rRNA- and tRNA-based yeast transcripts cleaved by internal ribozyme activity.

Authors:  Katrin Düvel; Ralph Pries; Gerhard H Braus
Journal:  Curr Genet       Date:  2003-05-14       Impact factor: 3.886

2.  Release factor eRF3 mediates premature translation termination on polylysine-stalled ribosomes in Saccharomyces cerevisiae.

Authors:  Marco Chiabudini; Arlette Tais; Ying Zhang; Sachiko Hayashi; Tina Wölfle; Edith Fitzke; Sabine Rospert
Journal:  Mol Cell Biol       Date:  2014-08-25       Impact factor: 4.272

3.  Yeast transcripts cleaved by an internal ribozyme provide new insight into the role of the cap and poly(A) tail in translation and mRNA decay.

Authors:  Stacie Meaux; Ambro Van Hoof
Journal:  RNA       Date:  2006-05-19       Impact factor: 4.942

4.  3'-end formation signals modulate the association of genes with the nuclear periphery as well as mRNP dot formation.

Authors:  Katharine C Abruzzi; Dmitry A Belostotsky; Julia A Chekanova; Ken Dower; Michael Rosbash
Journal:  EMBO J       Date:  2006-08-31       Impact factor: 11.598

5.  A conserved role for cytoplasmic poly(A)-binding protein 1 (PABPC1) in nonsense-mediated mRNA decay.

Authors:  Isabelle Behm-Ansmant; David Gatfield; Jan Rehwinkel; Valérie Hilgers; Elisa Izaurralde
Journal:  EMBO J       Date:  2007-02-22       Impact factor: 11.598

6.  A quantitative analysis of intron effects on mammalian gene expression.

Authors:  Ajit Nott; Shlomo H Meislin; Melissa J Moore
Journal:  RNA       Date:  2003-05       Impact factor: 4.942

7.  Coupling of termination, 3' processing, and mRNA export.

Authors:  C M Hammell; Stefan Gross; Daniel Zenklusen; Catherine V Heath; Francoise Stutz; Claire Moore; C N Cole
Journal:  Mol Cell Biol       Date:  2002-09       Impact factor: 4.272

Review 8.  Messenger RNA export from the nucleus: a series of molecular wardrobe changes.

Authors:  Seth M Kelly; Anita H Corbett
Journal:  Traffic       Date:  2009-06-27       Impact factor: 6.215

9.  A synthetic A tail rescues yeast nuclear accumulation of a ribozyme-terminated transcript.

Authors:  Ken Dower; Nicolas Kuperwasser; Houra Merrikh; Michael Rosbash
Journal:  RNA       Date:  2004-12       Impact factor: 4.942

10.  Reporter mRNAs cleaved by Rnt1p are exported and degraded in the cytoplasm.

Authors:  Stacie Meaux; Mathieu Lavoie; Jules Gagnon; Sherif Abou Elela; Ambro van Hoof
Journal:  Nucleic Acids Res       Date:  2011-08-05       Impact factor: 16.971

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