Literature DB >> 11973288

Genetic and physical interactions between DPB11 and DDC1 in the yeast DNA damage response pathway.

Hong Wang1, Stephen J Elledge.   

Abstract

DPB11 is essential for DNA replication and S/M checkpoint control in Saccharomyces cerevisiae. The Dpb11 protein contains four BRCT domains, which have been proposed to be involved in protein-protein interactions. To further investigate the regulation and function of Dpb11, a yeast two-hybrid screen was carried out to identify proteins that physically interact with Dpb11. One positive clone isolated from the screen encoded a carboxyl-terminal fragment of Ddc1 (339-612 aa). Ddc1 is a DNA damage checkpoint protein, which, together with Mec3 and Rad17, has been proposed to form a PCNA-like complex and acts upstream in the DNA damage checkpoint pathways. We further determined that the carboxyl region of Dpb11 is required for its interaction with Ddc1. DDC1 and DPB11 also interact genetically. The Deltaddc1 dpb11-1 double mutant is more UV and MMS sensitive than the Deltaddc1 or the dpb11-1 single mutants. Furthermore, the double mutant is more hydroxyurea sensitive and displayed a lower restrictive temperature than dpb11-1. These results suggest that DPB11 and DDC1 may function in the same or parallel pathways after DNA damage and that DDC1 may play a role in responding to replication defects.

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Year:  2002        PMID: 11973288      PMCID: PMC1462046     

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  37 in total

1.  Role of a complex containing Rad17, Mec3, and Ddc1 in the yeast DNA damage checkpoint pathway.

Authors:  T Kondo; K Matsumoto; K Sugimoto
Journal:  Mol Cell Biol       Date:  1999-02       Impact factor: 4.272

2.  Structure of an XRCC1 BRCT domain: a new protein-protein interaction module.

Authors:  X Zhang; S Moréra; P A Bates; P C Whitehead; A I Coffer; K Hainbucher; R A Nash; M J Sternberg; T Lindahl; P S Freemont
Journal:  EMBO J       Date:  1998-11-02       Impact factor: 11.598

3.  A superfamily of conserved domains in DNA damage-responsive cell cycle checkpoint proteins.

Authors:  P Bork; K Hofmann; P Bucher; A F Neuwald; S F Altschul; E V Koonin
Journal:  FASEB J       Date:  1997-01       Impact factor: 5.191

4.  A DNA-topoisomerase-II-binding protein with eight repeating regions similar to DNA-repair enzymes and to a cell-cycle regulator.

Authors:  K Yamane; M Kawabata; T Tsuruo
Journal:  Eur J Biochem       Date:  1997-12-15

5.  Damage and replication checkpoint control in fission yeast is ensured by interactions of Crb2, a protein with BRCT motif, with Cut5 and Chk1.

Authors:  Y Saka; F Esashi; T Matsusaka; S Mochida; M Yanagida
Journal:  Genes Dev       Date:  1997-12-15       Impact factor: 11.361

6.  Characterisation of the Schizosaccharomyces pombe rad4/cut5 mutant phenotypes: dissection of DNA replication and G2 checkpoint control function.

Authors:  R J McFarlane; A M Carr; C Price
Journal:  Mol Gen Genet       Date:  1997-07

7.  Incorporation and excision of 9-(2-phosphonylmethoxyethyl)guanine (PMEG) by DNA polymerase delta and epsilon in vitro.

Authors:  P Kramata; K M Downey; L R Paborsky
Journal:  J Biol Chem       Date:  1998-08-21       Impact factor: 5.157

8.  Recovery from DNA replicational stress is the essential function of the S-phase checkpoint pathway.

Authors:  B A Desany; A A Alcasabas; J B Bachant; S J Elledge
Journal:  Genes Dev       Date:  1998-09-15       Impact factor: 11.361

9.  Sld2, which interacts with Dpb11 in Saccharomyces cerevisiae, is required for chromosomal DNA replication.

Authors:  Y Kamimura; H Masumoto; A Sugino; H Araki
Journal:  Mol Cell Biol       Date:  1998-10       Impact factor: 4.272

10.  Mec1p is essential for phosphorylation of the yeast DNA damage checkpoint protein Ddc1p, which physically interacts with Mec3p.

Authors:  V Paciotti; G Lucchini; P Plevani; M P Longhese
Journal:  EMBO J       Date:  1998-07-15       Impact factor: 11.598

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  47 in total

1.  Mrc1 is a replication fork component whose phosphorylation in response to DNA replication stress activates Rad53.

Authors:  Alexander J Osborn; Stephen J Elledge
Journal:  Genes Dev       Date:  2003-07-15       Impact factor: 11.361

2.  Identification and cloning of two putative subunits of DNA polymerase epsilon in fission yeast.

Authors:  Maria-Grazia Spiga; Gennaro D'Urso
Journal:  Nucleic Acids Res       Date:  2004-09-23       Impact factor: 16.971

3.  The unstructured C-terminal tail of yeast Dpb11 (human TopBP1) protein is dispensable for DNA replication and the S phase checkpoint but required for the G2/M checkpoint.

Authors:  Vasundhara M Navadgi-Patil; Sandeep Kumar; Peter M Burgers
Journal:  J Biol Chem       Date:  2011-09-28       Impact factor: 5.157

4.  Phosphorylation of Xenopus Rad1 and Hus1 defines a readout for ATR activation that is independent of Claspin and the Rad9 carboxy terminus.

Authors:  Patrick J Lupardus; Karlene A Cimprich
Journal:  Mol Biol Cell       Date:  2006-01-25       Impact factor: 4.138

5.  Analysis of replication profiles reveals key role of RFC-Ctf18 in yeast replication stress response.

Authors:  Laure Crabbé; Aubin Thomas; Véronique Pantesco; John De Vos; Philippe Pasero; Armelle Lengronne
Journal:  Nat Struct Mol Biol       Date:  2010-10-24       Impact factor: 15.369

6.  Checkpoint genes and Exo1 regulate nearby inverted repeat fusions that form dicentric chromosomes in Saccharomyces cerevisiae.

Authors:  Salma Kaochar; Lisa Shanks; Ted Weinert
Journal:  Proc Natl Acad Sci U S A       Date:  2010-11-23       Impact factor: 11.205

7.  Colocalization of sensors is sufficient to activate the DNA damage checkpoint in the absence of damage.

Authors:  Carla Yaneth Bonilla; Justine Amy Melo; David Paul Toczyski
Journal:  Mol Cell       Date:  2008-05-09       Impact factor: 17.970

8.  A genome-wide screen for methyl methanesulfonate-sensitive mutants reveals genes required for S phase progression in the presence of DNA damage.

Authors:  Michael Chang; Mohammed Bellaoui; Charles Boone; Grant W Brown
Journal:  Proc Natl Acad Sci U S A       Date:  2002-12-13       Impact factor: 11.205

9.  The Rad9-Hus1-Rad1 (9-1-1) clamp activates checkpoint signaling via TopBP1.

Authors:  Sinny Delacroix; Jill M Wagner; Masahiko Kobayashi; Ken-ichi Yamamoto; Larry M Karnitz
Journal:  Genes Dev       Date:  2007-06-15       Impact factor: 11.361

10.  The unstructured C-terminal tail of the 9-1-1 clamp subunit Ddc1 activates Mec1/ATR via two distinct mechanisms.

Authors:  Vasundhara M Navadgi-Patil; Peter M Burgers
Journal:  Mol Cell       Date:  2009-12-11       Impact factor: 17.970

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