Literature DB >> 11972336

Insertions in the anticodon loop of tRNA1Gln(sufG) and tRNA(Lys) promote quadruplet decoding of CAAA.

Michael O'Connor1.   

Abstract

Base insertion mutations in the anticodons of two different Escherichia coli tRNAs have been isolated that allow suppression of a series of +1 frameshift mutations. Insertion of a U between positions 34 and 35 of tRNAGln1 or addition of a G between positions 36 and 37 of tRNA(Lys) expand the anticodons of both tRNAs similarly to 3'-GUUU(-5') and allow decoding of complementary 5'-CAAA(-3') quadruplets. Analysis of the suppressed mRNA sequences suggests that suppression occurs by pairing of the expanded anticodons to all four bases of the complementary, quadruplet codon. The tRNA Gln mutants are identical to the sufG class of frameshift suppressors isolated both in Salmonella enterica serovar Typhimurium and E. coli by Kohno and Roth and previously thought to affect tRNA(Lys).

Entities:  

Mesh:

Substances:

Year:  2002        PMID: 11972336      PMCID: PMC113831          DOI: 10.1093/nar/30.9.1985

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  22 in total

Review 1.  How translational accuracy influences reading frame maintenance.

Authors:  P J Farabaugh; G R Björk
Journal:  EMBO J       Date:  1999-03-15       Impact factor: 11.598

2.  Acetylornithinase of Escherichia coli: partial purification and some properties.

Authors:  H J VOGEL; D M BONNER
Journal:  J Biol Chem       Date:  1956-01       Impact factor: 5.157

3.  Letter to the editor: Characterization of mutations in the tryptophan operon of Escherichia coli by RNA nucleotide sequencing.

Authors:  M J Bronson; C Yanofsky
Journal:  J Mol Biol       Date:  1974-10-05       Impact factor: 5.469

4.  Four-base codons ACCA, ACCU and ACCC are recognized by frameshift suppressor sufJ.

Authors:  L Bossi; J R Roth
Journal:  Cell       Date:  1981-08       Impact factor: 41.582

5.  Incorporation of nonnatural amino acids into proteins by using various four-base codons in an Escherichia coli in vitro translation system.

Authors:  T Hohsaka; Y Ashizuka; H Taira; H Murakami; M Sisido
Journal:  Biochemistry       Date:  2001-09-18       Impact factor: 3.162

6.  Versatile low-copy-number plasmid vectors for cloning in Escherichia coli.

Authors:  N G Stoker; N F Fairweather; B G Spratt
Journal:  Gene       Date:  1982-06       Impact factor: 3.688

7.  A Salmonella frameshift suppressor that acts at runs of A residues in the messenger RNA.

Authors:  T Kohno; J R Roth
Journal:  J Mol Biol       Date:  1978-11-25       Impact factor: 5.469

8.  Five-base codons for incorporation of nonnatural amino acids into proteins.

Authors:  T Hohsaka; Y Ashizuka; H Murakami; M Sisido
Journal:  Nucleic Acids Res       Date:  2001-09-01       Impact factor: 16.971

9.  Assembly of the mitochondrial membrane system: sequences of yeast mitochondrial valine and an unusual threonine tRNA gene.

Authors:  M Li; A Tzagoloff
Journal:  Cell       Date:  1979-09       Impact factor: 41.582

10.  Expanding the genetic code: selection of efficient suppressors of four-base codons and identification of "shifty" four-base codons with a library approach in Escherichia coli.

Authors:  T J Magliery; J C Anderson; P G Schultz
Journal:  J Mol Biol       Date:  2001-03-30       Impact factor: 5.469

View more
  7 in total

1.  Recognition and positioning of mRNA in the ribosome by tRNAs with expanded anticodons.

Authors:  Sarah E Walker; Kurt Fredrick
Journal:  J Mol Biol       Date:  2006-05-17       Impact factor: 5.469

Review 2.  A gripping tale of ribosomal frameshifting: extragenic suppressors of frameshift mutations spotlight P-site realignment.

Authors:  John F Atkins; Glenn R Björk
Journal:  Microbiol Mol Biol Rev       Date:  2009-03       Impact factor: 11.056

Review 3.  Genetic Code Expansion Through Quadruplet Codon Decoding.

Authors:  Jiantao Guo; Wei Niu
Journal:  J Mol Biol       Date:  2021-11-08       Impact factor: 6.151

4.  Development of mammalian cell logic gates controlled by unnatural amino acids.

Authors:  Emily M Mills; Victoria L Barlow; Arwyn T Jones; Yu-Hsuan Tsai
Journal:  Cell Rep Methods       Date:  2021-09-16

5.  An expanded genetic code with a functional quadruplet codon.

Authors:  J Christopher Anderson; Ning Wu; Stephen W Santoro; Vishva Lakshman; David S King; Peter G Schultz
Journal:  Proc Natl Acad Sci U S A       Date:  2004-05-11       Impact factor: 11.205

6.  The wobble hypothesis revisited: uridine-5-oxyacetic acid is critical for reading of G-ending codons.

Authors:  S Joakim Näsvall; Peng Chen; Glenn R Björk
Journal:  RNA       Date:  2007-10-17       Impact factor: 4.942

7.  Measuring the tolerance of the genetic code to altered codon size.

Authors:  Erika Alden DeBenedictis; Dieter Söll; Kevin M Esvelt
Journal:  Elife       Date:  2022-03-16       Impact factor: 8.713

  7 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.