Literature DB >> 11964924

DNA banking for epidemiologic studies: a review of current practices.

Karen Steinberg1, Jeanne Beck, Deborah Nickerson, Montserrat Garcia-Closas, Margaret Gallagher, Michele Caggana, Yvonne Reid, Mark Cosentino, Jay Ji, Delene Johnson, Richard B Hayes, Marie Earley, Fred Lorey, Harry Hannon, Muin J Khoury, Eric Sampson.   

Abstract

To study genetic risk factors for common diseases, researchers have begun collecting DNA specimens in large epidemiologic studies and surveys. However, little information is available to guide researchers in selecting the most appropriate specimens. In an effort to gather the best information for the selection of specimens for these studies, we convened a meeting of scientists engaged in DNA banking for large epidemiologic studies. In this discussion, we review the information presented at that meeting in the context of recent published information. Factors to be considered in choosing the appropriate specimens for epidemiologic studies include quality and quantity of DNA, convenience of collection and storage, cost, and ability to accommodate future needs for genotyping. We focus on four types of specimens that are stored in these banks: (1) whole blood preserved as dried blood spots; (2) whole blood from which genomic DNA is isolated, (3) immortalized lymphocytes from whole blood or separated lymphocytes, prepared immediately or subsequent to cryopreservation; and (4) buccal epithelial cells. Each of the specimens discussed is useful for epidemiologic studies according to specific needs, which we enumerate in our conclusions.

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Substances:

Year:  2002        PMID: 11964924     DOI: 10.1097/00001648-200205000-00003

Source DB:  PubMed          Journal:  Epidemiology        ISSN: 1044-3983            Impact factor:   4.822


  29 in total

1.  Zinc supplementation of young men alters metallothionein, zinc transporter, and cytokine gene expression in leukocyte populations.

Authors:  Tolunay Beker Aydemir; Raymond K Blanchard; Robert J Cousins
Journal:  Proc Natl Acad Sci U S A       Date:  2006-01-24       Impact factor: 11.205

Review 2.  [Structure of biobanks for urological research].

Authors:  G Hatiboglu; J Huber; E Herpel; I V Popeneciu; J Nyarangi-Dix; D Teber; B A Hadaschik; S Pahernik; S Duensing; M Hohenfellner
Journal:  Urologe A       Date:  2015-09       Impact factor: 0.639

3.  Establishment of a biorepository for migraine research: the experience of Interinstitutional Multidisciplinary BioBank (BioBIM).

Authors:  Raffaele Palmirotta; Piero Barbanti; Giorgia Ludovici; Gabriella Egeo; Cinzia Aurilia; Luisa Fofi; Maria Laura De Marchis; Antonella Spila; Patrizia Ferroni; David Della-Morte; Fiorella Guadagni
Journal:  Neurol Sci       Date:  2013-01-26       Impact factor: 3.307

4.  Ethical and Legal Issues in Biobanking for Genomic Research in Nigeria.

Authors:  Simisola O Akintola
Journal:  BEOnline       Date:  2012

Review 5.  The procurement, storage, and quality assurance of frozen blood and tissue biospecimens in pathology, biorepository, and biobank settings.

Authors:  Maryam Shabihkhani; Gregory M Lucey; Bowen Wei; Sergey Mareninov; Jerry J Lou; Harry V Vinters; Elyse J Singer; Timothy F Cloughesy; William H Yong
Journal:  Clin Biochem       Date:  2014-01-12       Impact factor: 3.281

6.  Comparison of the genotyping results using DNA obtained from blood and saliva.

Authors:  Robert A Philibert; Olga Zadorozhnyaya; Steven R H Beach; Gene H Brody
Journal:  Psychiatr Genet       Date:  2008-12       Impact factor: 2.458

7.  Participant characteristics that influence consent for genetic research in a population-based survey: the Baltimore epidemiologic catchment area follow-up.

Authors:  Briana Mezuk; William W Eaton; Peter Zandi
Journal:  Community Genet       Date:  2008-03-26

8.  Violence and post-traumatic stress disorder in Sao Paulo and Rio de Janeiro, Brazil: the protocol for an epidemiological and genetic survey.

Authors:  Sérgio Baxter Andreoli; Wagner Silva Ribeiro; Maria Ines Quintana; Camila Guindalini; Gerome Breen; Sergio Luis Blay; Evandro S F Coutinho; Trudy Harpham; Miguel Roberto Jorge; Diogo Rizzato Lara; Tais S Moriyama; Lucas C Quarantini; Ary Gadelha; Liliane Maria Pereira Vilete; Mary S L Yeh; Martin Prince; Ivan Figueira; Rodrigo A Bressan; Marcelo F Mello; Michael E Dewey; Cleusa P Ferri; Jair de Jesus Mari
Journal:  BMC Psychiatry       Date:  2009-06-07       Impact factor: 3.630

9.  Determinants of DNA yield and purity collected with buccal cell samples.

Authors:  D B M A van Wieren-de Wijer; A H Maitland-van der Zee; A de Boer; S V Belitser; A A Kroon; P W de Leeuw; P Schiffers; R G J H Janssen; C M van Duijn; B H C H Stricker; O H Klungel
Journal:  Eur J Epidemiol       Date:  2009-09-17       Impact factor: 8.082

10.  Blood spots as an alternative to whole blood collection and the effect of a small monetary incentive to increase participation in genetic association studies.

Authors:  Parveen Bhatti; Diane Kampa; Bruce H Alexander; Christopher McClure; Danny Ringer; Michele M Doody; Alice J Sigurdson
Journal:  BMC Med Res Methodol       Date:  2009-11-13       Impact factor: 4.615

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