Literature DB >> 11927565

Trm7p catalyses the formation of two 2'-O-methylriboses in yeast tRNA anticodon loop.

Lionel Pintard1, François Lecointe, Janusz M Bujnicki, Claire Bonnerot, Henri Grosjean, Bruno Lapeyre.   

Abstract

The genome of Saccharomyces cerevisiae encodes three close homologues of the Escherichia coli 2'-O-rRNA methyltransferase FtsJ/RrmJ, designated Trm7p, Spb1p and Mrm2p. We present evidence that Trm7p methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop, both in vivo and in vitro. In a trm7Delta strain, which is viable but grows slowly, translation is impaired, thus indicating that these tRNA modifications could be important for translation efficiency. We discuss the emergence of a family of three 2'-O-RNA methyltransferases in Eukaryota and one in Prokaryota from a common ancestor. We propose that each eukaryotic enzyme is located in a different cell compartment, in which it would methylate a different RNA that can adopt a very similar secondary structure.

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Year:  2002        PMID: 11927565      PMCID: PMC125368          DOI: 10.1093/emboj/21.7.1811

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  44 in total

1.  The FtsJ/RrmJ heat shock protein of Escherichia coli is a 23 S ribosomal RNA methyltransferase.

Authors:  T Caldas; E Binet; P Bouloc; A Costa; J Desgres; G Richarme
Journal:  J Biol Chem       Date:  2000-06-02       Impact factor: 5.157

2.  Translational defects of Escherichia coli mutants deficient in the Um(2552) 23S ribosomal RNA methyltransferase RrmJ/FTSJ.

Authors:  T Caldas; E Binet; P Bouloc; G Richarme
Journal:  Biochem Biophys Res Commun       Date:  2000-05-19       Impact factor: 3.575

3.  Effects of anticodon 2'-O-methylations on tRNA codon recognition in an Escherichia coli cell-free translation.

Authors:  A Satoh; K Takai; R Ouchi; S Yokoyama; H Takaku
Journal:  RNA       Date:  2000-05       Impact factor: 4.942

4.  Spb1p is a yeast nucleolar protein associated with Nop1p and Nop58p that is able to bind S-adenosyl-L-methionine in vitro.

Authors:  L Pintard; D Kressler; B Lapeyre
Journal:  Mol Cell Biol       Date:  2000-02       Impact factor: 4.272

5.  The Gcd10p/Gcd14p complex is the essential two-subunit tRNA(1-methyladenosine) methyltransferase of Saccharomyces cerevisiae.

Authors:  J Anderson; L Phan; A G Hinnebusch
Journal:  Proc Natl Acad Sci U S A       Date:  2000-05-09       Impact factor: 11.205

6.  Comparative protein modelling by satisfaction of spatial restraints.

Authors:  A Sali; T L Blundell
Journal:  J Mol Biol       Date:  1993-12-05       Impact factor: 5.469

7.  Recognition of errors in three-dimensional structures of proteins.

Authors:  M J Sippl
Journal:  Proteins       Date:  1993-12

8.  Spb1p is a putative methyltransferase required for 60S ribosomal subunit biogenesis in Saccharomyces cerevisiae.

Authors:  D Kressler; M Rojo; P Linder; J Cruz
Journal:  Nucleic Acids Res       Date:  1999-12-01       Impact factor: 16.971

9.  Identification of the TRM2 gene encoding the tRNA(m5U54)methyltransferase of Saccharomyces cerevisiae.

Authors:  M E Nordlund; J O Johansson; U von Pawel-Rammingen; A S Byström
Journal:  RNA       Date:  2000-06       Impact factor: 4.942

10.  Mutations in eukaryotic 18S ribosomal RNA affect translational fidelity and resistance to aminoglycoside antibiotics.

Authors:  Y O Chernoff; A Vincent; S W Liebman
Journal:  EMBO J       Date:  1994-02-15       Impact factor: 11.598

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  89 in total

1.  tRNomics: analysis of tRNA genes from 50 genomes of Eukarya, Archaea, and Bacteria reveals anticodon-sparing strategies and domain-specific features.

Authors:  Christian Marck; Henri Grosjean
Journal:  RNA       Date:  2002-10       Impact factor: 4.942

2.  A domain of the actin binding protein Abp140 is the yeast methyltransferase responsible for 3-methylcytidine modification in the tRNA anti-codon loop.

Authors:  Sonia D'Silva; Steffen J Haider; Eric M Phizicky
Journal:  RNA       Date:  2011-04-25       Impact factor: 4.942

3.  A primordial RNA modification enzyme: the case of tRNA (m1A) methyltransferase.

Authors:  Martine Roovers; Johan Wouters; Janusz M Bujnicki; Catherine Tricot; Victor Stalon; Henri Grosjean; Louis Droogmans
Journal:  Nucleic Acids Res       Date:  2004-01-22       Impact factor: 16.971

4.  Mutations in the FTSJ1 gene coding for a novel S-adenosylmethionine-binding protein cause nonsyndromic X-linked mental retardation.

Authors:  Kristine Freude; Kirsten Hoffmann; Lars-Riff Jensen; Martin B Delatycki; Vincent des Portes; Bettina Moser; Ben Hamel; Hans van Bokhoven; Claude Moraine; Jean-Pierre Fryns; Jamel Chelly; Jozef Gécz; Steffen Lenzner; Vera M Kalscheuer; Hans-Hilger Ropers
Journal:  Am J Hum Genet       Date:  2004-05-25       Impact factor: 11.025

5.  Substrate binding analysis of the 23S rRNA methyltransferase RrmJ.

Authors:  Jutta Hager; Bart L Staker; Ursula Jakob
Journal:  J Bacteriol       Date:  2004-10       Impact factor: 3.490

Review 6.  tRNA biology charges to the front.

Authors:  Eric M Phizicky; Anita K Hopper
Journal:  Genes Dev       Date:  2010-09-01       Impact factor: 11.361

7.  Defects in tRNA Anticodon Loop 2'-O-Methylation Are Implicated in Nonsyndromic X-Linked Intellectual Disability due to Mutations in FTSJ1.

Authors:  Michael P Guy; Marie Shaw; Catherine L Weiner; Lynne Hobson; Zornitza Stark; Katherine Rose; Vera M Kalscheuer; Jozef Gecz; Eric M Phizicky
Journal:  Hum Mutat       Date:  2015-09-10       Impact factor: 4.878

8.  The Cm56 tRNA modification in archaea is catalyzed either by a specific 2'-O-methylase, or a C/D sRNP.

Authors:  Marie-Hélène Renalier; Nicole Joseph; Christine Gaspin; Patricia Thebault; Annie Mougin
Journal:  RNA       Date:  2005-07       Impact factor: 4.942

Review 9.  Identification of genes encoding tRNA modification enzymes by comparative genomics.

Authors:  Valérie de Crécy-Lagard
Journal:  Methods Enzymol       Date:  2007       Impact factor: 1.600

10.  Chromatin-associated genes protect the yeast genome from Ty1 insertional mutagenesis.

Authors:  Katherine M Nyswaner; Mary Ann Checkley; Ming Yi; Robert M Stephens; David J Garfinkel
Journal:  Genetics       Date:  2008-01       Impact factor: 4.562

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