Literature DB >> 11917126

Function of quaking in myelination: regulation of alternative splicing.

Jiang I Wu1, Robyn B Reed, Paula J Grabowski, Karen Artzt.   

Abstract

Proteomic diversity is frequently achieved by alternative RNA-splicing events that can be fine-tuned in tissue-specific and developmentally regulated ways. Understanding this type of genetic regulation is compelling because of the extensive complexity of alternative splicing found in the nervous system. quaking (qk), one of the classical mouse dysmyelination mutants, is defective for the expression of myelin-associated glycoprotein (MAG), and the misregulation of MAG pre-mRNA alternative splicing is implicated as a causal factor. The qk locus encodes several RNA-binding proteins with heterogeneous nuclear ribonucleoprotein K-type homology, a characteristic of several known alternative splicing regulators. Here we test the nuclear-localized qk isoform (QKI-5) for its ability to regulate alternative splicing of MAG pre-mRNA in transient coexpression assays. QKI-5 exhibits properties of a negative regulator of MAG exon 12 alternative splicing. An intronic sequence element required for the repressive function and binding of QKI-5 is also identified. Direct evidence for irregularities in alternative splicing of MAG and other myelin protein transcripts in the qk mouse is demonstrated.

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Year:  2002        PMID: 11917126      PMCID: PMC123631          DOI: 10.1073/pnas.072090399

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  32 in total

Review 1.  Alternative splicing of pre-mRNA: developmental consequences and mechanisms of regulation.

Authors:  A J Lopez
Journal:  Annu Rev Genet       Date:  1998       Impact factor: 16.830

2.  Coordinate repression of a trio of neuron-specific splicing events by the splicing regulator PTB.

Authors:  L Zhang; W Liu; P J Grabowski
Journal:  RNA       Date:  1999-01       Impact factor: 4.942

Review 3.  Multiple functions of the myelin-associated glycoprotein MAG (siglec-4a) in formation and maintenance of myelin.

Authors:  M Schachner; U Bartsch
Journal:  Glia       Date:  2000-01-15       Impact factor: 7.452

4.  The quaking I-5 protein (QKI-5) has a novel nuclear localization signal and shuttles between the nucleus and the cytoplasm.

Authors:  J Wu; L Zhou; K Tonissen; R Tee; K Artzt
Journal:  J Biol Chem       Date:  1999-10-08       Impact factor: 5.157

5.  The cytoplasmic domain of the large myelin-associated glycoprotein isoform is needed for proper CNS but not peripheral nervous system myelination.

Authors:  N Fujita; A Kemper; J Dupree; H Nakayasu; U Bartsch; M Schachner; N Maeda; K Suzuki; B Popko
Journal:  J Neurosci       Date:  1998-03-15       Impact factor: 6.167

6.  Genomic organization and expression analysis of the mouse qkI locus.

Authors:  T Kondo; T Furuta; K Mitsunaga; T A Ebersole; M Shichiri; J Wu; K Artzt; K Yamamura; K Abe
Journal:  Mamm Genome       Date:  1999-07       Impact factor: 2.957

7.  Neural cell type-specific expression of QKI proteins is altered in quakingviable mutant mice.

Authors:  R J Hardy; C L Loushin; V L Friedrich; Q Chen; T A Ebersole; R A Lazzarini; K Artzt
Journal:  J Neurosci       Date:  1996-12-15       Impact factor: 6.167

8.  Contrasting effects of ENU induced embryonic lethal mutations of the quaking gene.

Authors:  R D Cox; A Hugill; A Shedlovsky; J K Noveroske; S Best; M J Justice; H Lehrach; W F Dove
Journal:  Genomics       Date:  1999-05-01       Impact factor: 5.736

9.  MUTANT MICE (QUAKING AND JIMPY) WITH DEFICIENT MYELINATION IN THE CENTRAL NERVOUS SYSTEM.

Authors:  R L SIDMAN; M M DICKIE; S H APPEL
Journal:  Science       Date:  1964-04-17       Impact factor: 47.728

Review 10.  Current concepts of PLP and its role in the nervous system.

Authors:  I Griffiths; M Klugmann; T Anderson; C Thomson; D Vouyiouklis; K A Nave
Journal:  Microsc Res Tech       Date:  1998-06-01       Impact factor: 2.769

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  77 in total

1.  Roles of hnRNP A1, SR proteins, and p68 helicase in c-H-ras alternative splicing regulation.

Authors:  Sònia Guil; Renata Gattoni; Montserrat Carrascal; Joaquín Abián; James Stévenin; Montse Bach-Elias
Journal:  Mol Cell Biol       Date:  2003-04       Impact factor: 4.272

2.  Deciphering the splicing code.

Authors:  Yoseph Barash; John A Calarco; Weijun Gao; Qun Pan; Xinchen Wang; Ofer Shai; Benjamin J Blencowe; Brendan J Frey
Journal:  Nature       Date:  2010-05-06       Impact factor: 49.962

Review 3.  Insights into the structural basis of RNA recognition by STAR domain proteins.

Authors:  Sean P Ryder; Francesca Massi
Journal:  Adv Exp Med Biol       Date:  2010       Impact factor: 2.622

4.  A nuclear function of Hu proteins as neuron-specific alternative RNA processing regulators.

Authors:  Hui Zhu; Robert A Hasman; Victoria A Barron; Guangbin Luo; Hua Lou
Journal:  Mol Biol Cell       Date:  2006-10-11       Impact factor: 4.138

5.  The search for alternative splicing regulators: new approaches offer a path to a splicing code.

Authors:  Charles J David; James L Manley
Journal:  Genes Dev       Date:  2008-02-01       Impact factor: 11.361

6.  STAR family RNA-binding protein ASD-2 regulates developmental switching of mutually exclusive alternative splicing in vivo.

Authors:  Genta Ohno; Masatoshi Hagiwara; Hidehito Kuroyanagi
Journal:  Genes Dev       Date:  2008-01-29       Impact factor: 11.361

Review 7.  Networking in a global world: establishing functional connections between neural splicing regulators and their target transcripts.

Authors:  John A Calarco; Mei Zhen; Benjamin J Blencowe
Journal:  RNA       Date:  2011-03-17       Impact factor: 4.942

8.  A vertebrate RNA-binding protein Fox-1 regulates tissue-specific splicing via the pentanucleotide GCAUG.

Authors:  Yui Jin; Hitoshi Suzuki; Shingo Maegawa; Hitoshi Endo; Sumio Sugano; Katsuyuki Hashimoto; Kunio Yasuda; Kunio Inoue
Journal:  EMBO J       Date:  2003-02-17       Impact factor: 11.598

9.  The QKI-6 RNA binding protein regulates actin-interacting protein-1 mRNA stability during oligodendrocyte differentiation.

Authors:  Evgueni Doukhanine; Christina Gavino; Jeffery D Haines; Guillermina Almazan; Stéphane Richard
Journal:  Mol Biol Cell       Date:  2010-07-14       Impact factor: 4.138

10.  The QKI-6 RNA binding protein localizes with the MBP mRNAs in stress granules of glial cells.

Authors:  Yunling Wang; Geneviève Lacroix; Jeffery Haines; Evgueni Doukhanine; Guillermina Almazan; Stéphane Richard
Journal:  PLoS One       Date:  2010-09-17       Impact factor: 3.240

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