Literature DB >> 12554873

Gene silencing in Caenorhabditis elegans by transitive RNA interference.

Matthew N Alder1, Shale Dames, Jeffrey Gaudet, Susan E Mango.   

Abstract

When a cell is exposed to double-stranded RNA (dsRNA), mRNA from the homologous gene is selectively degraded by a process called RNA interference (RNAi). Here, we provide evidence that dsRNA is amplified in Caenorhabditis elegans to ensure a robust RNAi response. Our data suggest a model in which mRNA targeted by RNAi functions as a template for 5' to 3' synthesis of new dsRNA (termed transitive RNAi). Strikingly, the effect is nonautonomous: dsRNA targeted to a gene expressed in one cell type can lead to transitive RNAi-mediated silencing of a second gene expressed in a distinct cell type. These data suggest dsRNA synthesized in vivo can mediate systemic RNAi.

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Year:  2003        PMID: 12554873      PMCID: PMC1370367          DOI: 10.1261/rna.2650903

Source DB:  PubMed          Journal:  RNA        ISSN: 1355-8382            Impact factor:   4.942


  54 in total

1.  The rde-1 gene, RNA interference, and transposon silencing in C. elegans.

Authors:  H Tabara; M Sarkissian; W G Kelly; J Fleenor; A Grishok; L Timmons; A Fire; C C Mello
Journal:  Cell       Date:  1999-10-15       Impact factor: 41.582

2.  RNAi as random degradative PCR: siRNA primers convert mRNA into dsRNAs that are degraded to generate new siRNAs.

Authors:  C Lipardi; Q Wei; B M Paterson
Journal:  Cell       Date:  2001-11-02       Impact factor: 41.582

3.  Exon-specific RNAi: a tool for dissecting the functional relevance of alternative splicing.

Authors:  Alicia M Celotto; Brenton R Graveley
Journal:  RNA       Date:  2002-06       Impact factor: 4.942

4.  EGO-1 is related to RNA-directed RNA polymerase and functions in germ-line development and RNA interference in C. elegans.

Authors:  A Smardon; J M Spoerke; S C Stacey; M E Klein; N Mackin; E M Maine
Journal:  Curr Biol       Date:  2000-02-24       Impact factor: 10.834

5.  On the role of RNA amplification in dsRNA-triggered gene silencing.

Authors:  T Sijen; J Fleenor; F Simmer; K L Thijssen; S Parrish; L Timmons; R H Plasterk; A Fire
Journal:  Cell       Date:  2001-11-16       Impact factor: 41.582

6.  Mut-7 of C. elegans, required for transposon silencing and RNA interference, is a homolog of Werner syndrome helicase and RNaseD.

Authors:  R F Ketting; T H Haverkamp; H G van Luenen; R H Plasterk
Journal:  Cell       Date:  1999-10-15       Impact factor: 41.582

7.  Posttranscriptional gene silencing in Neurospora by a RecQ DNA helicase.

Authors:  C Cogoni; G Macino
Journal:  Science       Date:  1999-12-17       Impact factor: 47.728

8.  Positional effects of short interfering RNAs targeting the human coagulation trigger Tissue Factor.

Authors:  Torgeir Holen; Mohammed Amarzguioui; Merete T Wiiger; Eshrat Babaie; Hans Prydz
Journal:  Nucleic Acids Res       Date:  2002-04-15       Impact factor: 16.971

9.  Involvement of small RNAs and role of the qde genes in the gene silencing pathway in Neurospora.

Authors:  Caterina Catalanotto; Gianluca Azzalin; Giuseppe Macino; Carlo Cogoni
Journal:  Genes Dev       Date:  2002-04-01       Impact factor: 11.361

10.  Spreading of RNA targeting and DNA methylation in RNA silencing requires transcription of the target gene and a putative RNA-dependent RNA polymerase.

Authors:  Fabián E Vaistij; Louise Jones; David C Baulcombe
Journal:  Plant Cell       Date:  2002-04       Impact factor: 11.277

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  39 in total

1.  The preferred route for the degradation of silencing target RNAs in transgenic plants depends on pre-established silencing conditions.

Authors:  Matthew Sanders; Nausicaa Lannoo; Wendy Maddelein; Anna Depicker; Marc Van Montagu; Marc Cornelissen; John Jacobs
Journal:  Nucleic Acids Res       Date:  2004-06-25       Impact factor: 16.971

Review 2.  In vivo RNAi: today and tomorrow.

Authors:  Norbert Perrimon; Jian-Quan Ni; Lizabeth Perkins
Journal:  Cold Spring Harb Perspect Biol       Date:  2010-06-09       Impact factor: 10.005

3.  Analysis of RNA silencing in agroinfiltrated leaves of Nicotiana benthamiana and Nicotiana tabacum.

Authors:  Edyta Kościańska; Kriton Kalantidis; Krzysztof Wypijewski; Jan Sadowski; Martin Tabler
Journal:  Plant Mol Biol       Date:  2005-11       Impact factor: 4.076

4.  Different effects on ACC oxidase gene silencing triggered by RNA interference in transgenic tomato.

Authors:  Ai-Sheng Xiong; Quan-Hong Yao; Ri-He Peng; Xian Li; Pei-Lai Han; Hui-Qin Fan
Journal:  Plant Cell Rep       Date:  2004-10-19       Impact factor: 4.570

5.  Evidence implying only unprimed RdRP activity during transitive gene silencing in plants.

Authors:  Birgit Otzen Petersen; Merete Albrechtsen
Journal:  Plant Mol Biol       Date:  2005-07       Impact factor: 4.076

6.  The frequency and efficiency of endogene suppression by transitive silencing signals is influenced by the length of sequence homology.

Authors:  Annick Bleys; Leen Vermeersch; Helena Van Houdt; Anna Depicker
Journal:  Plant Physiol       Date:  2006-08-04       Impact factor: 8.340

7.  Down-regulation of endogenes mediated by a transitive silencing signal.

Authors:  Annick Bleys; Helena Van Houdt; Anna Depicker
Journal:  RNA       Date:  2006-09       Impact factor: 4.942

8.  A T7-driven silencing system in transgenic plants expressing T7 RNA polymerase is a nuclear process.

Authors:  Yuval Peretz; Michal Levy; Eva Avisar; Orit Edelbaum; Haim Rabinowitch; Ilan Sela
Journal:  Transgenic Res       Date:  2007-10-12       Impact factor: 2.788

9.  RNA interference with special reference to combating viruses of crustacea.

Authors:  Kathy La Fauce; Leigh Owens
Journal:  Indian J Virol       Date:  2012-08-14

10.  The nuclear argonaute NRDE-3 contributes to transitive RNAi in Caenorhabditis elegans.

Authors:  Jimmy J Zhuang; Stephen A Banse; Craig P Hunter
Journal:  Genetics       Date:  2013-03-02       Impact factor: 4.562

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