Literature DB >> 11866618

An ab initio quantum-chemical study of the blue-copper site of azurin.

M van Gastel1, J W A Coremans, H Sommerdijk, M C van Hemert, E J J Groenen.   

Abstract

The electronic structure of the blue-copper site of Pseudomonas aeruginosa azurin has been investigated by ab initio multireference determinantal configuration interaction (MRD-CI) calculations. A truncated site consisting of copper and its three equatorial ligands has been studied with emphasis on the g tensor and the nitrogen hyperfine tensors of the coordinating histidines. In the ground state the singly occupied molecular orbital (SOMO) involves a copper 3d orbital pi antibonded to the cysteine sulfur and sigma antibonded to the histidine nitrogens. A proper description of the electron-paramagnetic-resonance parameters has been achieved through the use of an effective core potential for copper up to and including the 3s electrons. Both the complete g tensor and the anisotropic hyperfine tensors at the nitrogens are essentially reproduced. Mulliken spin densities of 35 and 59% on copper and sulfur, respectively, and 2.1 and 1.7% on the respective coordinating nitrogens reflect the delocalized character of the SOMO and the inequivalence of the histidines.

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Year:  2002        PMID: 11866618     DOI: 10.1021/ja0028166

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  7 in total

1.  Single-crystal EPR study at 95 GHz of the type 2 copper site of the inhibitor-bound quercetin 2,3-dioxygenase.

Authors:  Maria Fittipaldi; Roberto A Steiner; Michio Matsushita; Bauke W Dijkstra; Edgar J J Groenen; Martina Huber
Journal:  Biophys J       Date:  2003-12       Impact factor: 4.033

2.  Role of protein frame and solvent for the redox properties of azurin from Pseudomonas aeruginosa.

Authors:  Michele Cascella; Alessandra Magistrato; Ivano Tavernelli; Paolo Carloni; Ursula Rothlisberger
Journal:  Proc Natl Acad Sci U S A       Date:  2006-12-18       Impact factor: 11.205

3.  Reinvestigation of the method used to map the electronic structure of blue copper proteins by NMR relaxation.

Authors:  D Flemming Hansen; Serge I Gorelsky; Ritimukta Sarangi; Keith O Hodgson; Britt Hedman; Hans E M Christensen; Edward I Solomon; Jens J Led
Journal:  J Biol Inorg Chem       Date:  2006-01-24       Impact factor: 3.358

4.  Determination of the geometric structure of the metal site in a blue copper protein by paramagnetic NMR.

Authors:  D Flemming Hansen; Jens J Led
Journal:  Proc Natl Acad Sci U S A       Date:  2006-01-30       Impact factor: 11.205

5.  NMR hyperfine shifts in blue copper proteins: a quantum chemical investigation.

Authors:  Yong Zhang; Eric Oldfield
Journal:  J Am Chem Soc       Date:  2008-03-04       Impact factor: 15.419

6.  Converged Structural and Spectroscopic Properties for Refined QM/MM Models of Azurin.

Authors:  Christine E Schulz; Maurice van Gastel; Dimitrios A Pantazis; Frank Neese
Journal:  Inorg Chem       Date:  2021-05-03       Impact factor: 5.165

7.  Chemical Exchange at the Trinuclear Copper Center of Small Laccase from Streptomyces coelicolor.

Authors:  Rubin Dasgupta; Karthick B S S Gupta; Faezeh Nami; Huub J M de Groot; Gerard W Canters; Edgar J J Groenen; Marcellus Ubbink
Journal:  Biophys J       Date:  2020-05-29       Impact factor: 4.033

  7 in total

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