Literature DB >> 11856607

Sugarcane genomics: depicting the complex genome of an important tropical crop.

Laurent Grivet1, Paulo Arruda.   

Abstract

In the past few years, approaches such as molecular cytogenetics and the use of molecular markers have permitted significant advances in the establishment of the evolutionary origin and genome structure of sugarcane, an important polyploid crop. The availability of new resources, such as a bacterial artificial chromosome library and a huge collection of expressed sequence tags, has opened the gateway to promising functional analyses on a genomic scale.

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Year:  2002        PMID: 11856607     DOI: 10.1016/s1369-5266(02)00234-0

Source DB:  PubMed          Journal:  Curr Opin Plant Biol        ISSN: 1369-5266            Impact factor:   7.834


  81 in total

1.  Molecular cytogenetic investigation of chromosome composition and transmission in sugarcane.

Authors:  George Piperidis; Nathalie Piperidis; Angélique D'Hont
Journal:  Mol Genet Genomics       Date:  2010-06-08       Impact factor: 3.291

2.  Genomic distribution and characterization of EST-derived resistance gene analogs (RGAs) in sugarcane.

Authors:  M Rossi; P G Araujo; F Paulet; O Garsmeur; V M Dias; H Chen; M-A Van Sluys; A D'Hont
Journal:  Mol Genet Genomics       Date:  2003-05-06       Impact factor: 3.291

3.  Identification of a novel sugar transporter homologue strongly expressed in maturing stem vascular tissues of sugarcane by expressed sequence tag and microarray analysis.

Authors:  Rosanne E Casu; Christopher P L Grof; Anne L Rae; C Lynne McIntyre; Christine M Dimmock; John M Manners
Journal:  Plant Mol Biol       Date:  2003-05       Impact factor: 4.076

4.  High-throughput assessment of transgene copy number in sugarcane using real-time quantitative PCR.

Authors:  Rosanne E Casu; Alexandra Selivanova; Jai M Perroux
Journal:  Plant Cell Rep       Date:  2011-09-28       Impact factor: 4.570

5.  Changes in photosynthetic rates and gene expression of leaves during a source-sink perturbation in sugarcane.

Authors:  A J McCormick; M D Cramer; D A Watt
Journal:  Ann Bot       Date:  2007-10-17       Impact factor: 4.357

6.  Analysis of genome-wide linkage disequilibrium in the highly polyploid sugarcane.

Authors:  Louis-Marie Raboin; Jérôme Pauquet; Mike Butterfield; Angélique D'Hont; Jean-Christophe Glaszmann
Journal:  Theor Appl Genet       Date:  2008-01-15       Impact factor: 5.699

7.  Haplotype structure around Bru1 reveals a narrow genetic basis for brown rust resistance in modern sugarcane cultivars.

Authors:  L Costet; L Le Cunff; S Royaert; L-M Raboin; C Hervouet; L Toubi; H Telismart; O Garsmeur; Y Rousselle; J Pauquet; S Nibouche; J-C Glaszmann; J-Y Hoarau; A D'Hont
Journal:  Theor Appl Genet       Date:  2012-05-10       Impact factor: 5.699

8.  Diploid/polyploid syntenic shuttle mapping and haplotype-specific chromosome walking toward a rust resistance gene (Bru1) in highly polyploid sugarcane (2n approximately 12x approximately 115).

Authors:  Loïc Le Cunff; Olivier Garsmeur; Louis Marie Raboin; Jérome Pauquet; Hugues Telismart; Athiappan Selvi; Laurent Grivet; Romain Philippe; Dilara Begum; Monique Deu; Laurent Costet; Rod Wing; Jean Christophe Glaszmann; Angélique D'Hont
Journal:  Genetics       Date:  2008-08-30       Impact factor: 4.562

9.  Development of an integrated genetic map of a sugarcane (Saccharum spp.) commercial cross, based on a maximum-likelihood approach for estimation of linkage and linkage phases.

Authors:  A A F Garcia; E A Kido; A N Meza; H M B Souza; L R Pinto; M M Pastina; C S Leite; J A G da Silva; E C Ulian; A Figueira; A P Souza
Journal:  Theor Appl Genet       Date:  2005-11-24       Impact factor: 5.699

10.  Sugarcane genome sequencing by methylation filtration provides tools for genomic research in the genus Saccharum.

Authors:  Clícia Grativol; Michael Regulski; Marcelo Bertalan; W Richard McCombie; Felipe Rodrigues da Silva; Adhemar Zerlotini Neto; Renato Vicentini; Laurent Farinelli; Adriana Silva Hemerly; Robert A Martienssen; Paulo Cavalcanti Gomes Ferreira
Journal:  Plant J       Date:  2014-06-17       Impact factor: 6.417

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